Fusion transcript
DHH-RHEBL1 fusion transcript: a novel recurrent feature in the new landscape of pediatric CBFA2T3-GLIS2 -positive acute myeloid leukemia
... recurrent fusion transcript in 2 out of 4 CBFA2T3- GLIS2-positive ...novel fusion transcript is the result of a read-through that combines at least part of one exon with each of two distinct ...
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A Human Endogenous Retrovirus Suppresses Translation of an Associated Fusion Transcript, PLA2L
... Human endogenous retroviruses (HERVs) are repetitive, noninfectious chromosomal elements degenerated from exogenous retroviruses. The HERV-H family is composed of approximately 1,000 elements which are dispersed ...
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Characterization of a newly identified ETV6-NTRK3 fusion transcript in acute myeloid leukemia
... ETV6-NTRK3 fusion pro- teins have been detected in a significant fraction of non- hematopoietic tumors, ...ETV6-NTRK3 fusion has been reported in only one case of hematological malignancy, ...NTRK3 ...
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Accuracy assessment of fusion transcript detection via read mapping and de novo fusion transcript assembly based methods
... for fusion transcript detection We assessed 23 methods for fusion transcript detection, including 18 methods primarily based on read- alignments (Table 1): Arriba [17], ChimeraScan [19], ...
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Novel BRAF Alteration in a Sporadic Pilocytic Astrocytoma
... novel fusion transcript in which exon 16 of the KIAA1549 gene was fused to sequences within exon 10 of the BRAF gene (Figure 1(f)), generating a protein product in which the BRAF kinase domain is ...
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Establishment and genetic characterization of a novel mixed-phenotype acute leukemia cell line with EP300-ZNF384 fusion
... Herein, we describe the establishment and characterization of the first mixed-phenotype acute leukemia cell line (JIH-5). The JIH-5 cell line was established from leukemia cells with B lymphoid/myeloid phenotype from a ...
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Hyperdiploidy associated with T315I mutation in BCR-ABL kinase domain in an accelerated phase-chronic myeloid leukemia case
... According to the literature, there are a few near triploid karyotypes reported in advanced phase-CML [14,15]. Stagno et al. [2] found a CML case in blast phase with hyperdiploidy and it includes 10% mutant clones with ...
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Acute lymphoblastic leukemia with e1a3 BCR/ABL fusion protein. A report of two cases
... B Acute Lymphoblastic leukemia (B‑ALL) with Philadelphia chromosome (Ph′) is a neoplasm of lymphoblast commit‑ ted to the B cell lineage. The clinical presentation of B‑ALL Ph′ + is similar to B‑ALL, but is more common ...
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Identification of Novel Fusion Genes in Testicular Germ Cell Tumors
... of fusion genes or aberrant fusion transcript expression, we performed RNA sequencing of EC cell lines and their non- malignant ES cell line ...novel fusion transcripts and one gene with ...
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Detection of a common chimeric transcript between human chromosomes 7 and 16
... A fusion product detected from RT-PCR analysis of human prostate RNA fuses ZC3HAV1L exon 4 to part of CHMP1A exon 6, not at canonical splicing site but between a pair of 5 bp direct repeats at the ...
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Gastrointestinal malignancies harbor actionable MET exon 14 deletions
... METex14del transcript by multiplexed fusion transcript analysis using nCounter assay followed by confirmation with quantitative reverse transcription PCR with correlation to MET protein expression by ...
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Identification of gene fusion transcripts by transcriptome sequencing in BRCA1-mutated breast cancers and cell lines
... interchromosomal fusion transcript was found in HCC3153 involving exon 19 of WWC1 on chromosome 5 joining with exon 10 of ADRBK2 on chromosome ...the fusion junction and seven individual reads ...
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SET-NUP214 fusion in acute myeloid leukemia- and T-cell acute lymphoblastic leukemia-derived cell lines
... centromeric fusion to the untranslated region of SET exon 8 in LOUCY, and to the 3' region of SET in MEGAL, and telomerically to NUP214 intron 17/18 in both cell lines ...18 fusion transcript ...
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Thesis
... The results of the protein expression analysis also show that proteorhodopsin expression is up-regulated significantly under iron limitation. However, the up-regulation under low light observed in the relative ...
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Statistical Methods for Gene Differential Expression Analysis of RNA-Sequencing
... Transcript compatibility counts (TCCs) of RNA-Seq reads were obtained with the kallisto pseudo option, which outputs a TCC matrix whose two dimensions are the number of samples and number of equivalence classes. ...
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Transcript, What is the “Free Press”?
... talk radio programs, p articularly with satellite radio, and I’d be curious to hear any of the panel members’ thoughts on what kind of national implic a- tions this[r] ...
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Transcript, Judicial Independence
... prior convicts. The one that Judge Wald indicates is going to be the subject of some discussion: whether limitations of review of habeas corpus is a suspension or not under Article I[r] ...
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Presidential Authority Transcript
... Now, whatever objections one may have to that position—and I have several—the bottom line remains that this position is largely untested in court, both because there’s been little case[r] ...
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Transcript of Articles of Confederation
... The congress of the united states shall have power to adjourn to any time within the year, and to any place within the united states, so that no period of adjournment be for a longer duration than the space of six ...
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Transcript of Articles of Confederation.pdf
... The congress of the united states shall have power to adjourn to any time within the year, and to any place within the united states, so that no period of adjournment be for a longer duration than the space of six ...
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