Genetic linkage maps using the combined data
Constructing Genetic Linkage Maps Under a Tetrasomic Model
... of linkage between the dominant markers are usually slightly larger from algorithm II than from algorithm I, suggesting that the algorithm properly accounting for double reduc- tion has a better power to test for ...
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Integration of the Cytogenetic and Genetic Linkage Maps of Brassica oleracea
... Arabidopsis BAC contig used as a single FISH probe on We have assigned all nine linkage groups of a B. oleracea B. rapa metaphase chromosomes generated signals on genetic map to each of the nine chromosomes ...
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RAPD-Based Genetic Linkage Maps of Tribolium castaneum
... 1.—A linkage map of T. castaneum, based on RAPD markers. Linkage group assignments and initial positioning of markers was done using JoinMap version ...done using Map Manager version ...
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Integrating Genetic Linkage Maps With Pachytene Chromosome Structure in Maize
... ABSTRACT Genetic linkage maps reveal the order of markers based on the frequency of recombination between markers during ...relate linkage maps to chromosome structure. Here we use ...
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Integration of the Aedes aegypti Mosquito Genetic Linkage and Physical Maps
... aegypti genetic linkage map to the physical ...RFLP-based genetic markers so that large genomic clones from cosmid libraries could be found and placed to the metaphase chromosome physical maps ...
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Recent Advances in Molecular Genetic Linkage Maps of Cultivated Peanut
... analyzing data and translating the information to peanut breeding and improvement through discovery of genes governing and molecular markers associat- ed with the important ...
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Construction of Genetic Linkage Maps and Comparative Genome Analysis of Catfish Using Gene-Associated Markers
... each linkage group, con- verting the recombination rates into the Kosambi’s map dis- tance (in ...developed using a sequential map buildup (S tam ...
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Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-testcross: mapping strategy and RAPD markers.
... Characterization of genome complexity of a sample of 48 mapped random amplified polymorphic DNA (RAPD) markers indicate that 53% amplify from low copy regions. These are the [r] ...
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Construction of two genetic linkage maps in cultivated tetraploid alfalfa (Medicago sativa) using microsatellite and AFLP markers
... DNA. Using a F1 mapping population of 168 individuals produced from the cross of 2 heterozygous parental plants from Magali and Mercedes cultivars, we obtained 599 AFLP markers and 107 SSR ...the genetic ...
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Cosmopolitan linkage disequilibrium maps
... disorders using linkage disequilibrium (LD) and maps of single nucleotide polymorphisms (SNPs), it is of interest to consider a standard LD map which is somewhat analogous to the corresponding map ...
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Integration of Cytogenetic and Genetic Linkage Maps Unveils the Physical Architecture of Tomato Chromosome 2
... In the initial stage of genome sequencing, the marker- anchored BAC clones should be selected and termed as seed BAC clones. Because plants generally have many repetitive sequences the selection of accurate seed BAC ...
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Using probabilistic graphical models to reconstruct biological networks and linkage maps
... nine data points involved in each curve correspond to increasing threshold of structural feature selection, which steps between ...six data points that were obtained with fixed threshold ...
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Multitrait Fine Mapping of Quantitative Trait Loci Using Combined Linkage Disequilibria and Linkage Analysis
... from linkage dis- ...be combined with linkage informa- regions on the genome with genes affecting traits of tion in a model with random QTL ...by linkage analysis, which uti- The advantage of ...
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Learning expressive linkage rules using genetic programming
... in data integration and data cleansing is to find entities in different data sources that describe the same real-world ...explicit linkage rules which spec- ify the conditions that entities ...
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Construction of the Diploid, Tetraploid and Integrated Diploid-tetraploid Genetic Linkage Maps in Roses Using Simple Sequence Repeat (SSR) Markers
... the maps was excellent which should aid in the translation of genetic information from the diploid case to the tetraploid ...Therefore, using anchor marker, like RMS015 to look for/check whether Rdr1 ...
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High-Density Genetic Linkage Maps of Phytophthora infestans Reveal Trisomic Progeny and Chromosomal Rearrangements
... high-density genetic linkage map for P. infestans using cross 71: The markers analyzed consist largely of AFLP markers and reliability of this data set as judged by replicate samples of the ...
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A Combined Genetic Programming for Microarray Data Analysis
... 1. INTRODUCTION Due to the advanced developments in DNA microarray technology, scientists can now easily measure the expression levels of thousands of genes simultaneously in a biological organism. This has also made it ...
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Analysis of the genetic architecture of maize kernel size traits by combined linkage and association mapping
... Prediction and validation of target genes of zma- miR164e in Arabidopsis The target genes of zma-miR164e in Arabidopsis were predicted using a plant small RNA target analysis website (http://plantgrn.nob ...
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Fine Mapping of a Quantitative Trait Locus for Twinning Rate Using Combined Linkage and Linkage Disequilibrium Mapping
... combines linkage and linkage-disequilibrium information, is ...proposed. Linkage information refers to recombinations within the marker-genotyped generations and linkage disequilibrium to ...
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Parental and consensus linkage maps of Eucalyptus globulus using AFLP and microsatellite markers
... unpublished data), in order to facilitate a comparison of linkage group ...parental maps next to their nearest framework marker by their minimum recombination frequency and LOD ...integrated ...
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