Kegg pathway
Original Article The identification of the key genes and pathways in septic shock using an integrated bioinformatics analysis
... The KEGG pathway analysis results indicated that the upregulated DEGs were mainly enriched in ‘osteoclast differentia- tion’, ‘legionellosis’, and ‘amoebiasis’, but the downregulated DEGs were mainly ...
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Coexpression and coregulation analysis of time-series gene expression data in estrogen-induced breast cancer cell
... the KEGG pathway term ubiquitin mediated proteolysis (UBE2K, CUL4B, PIAS1, ...the KEGG pathway term ubiqui- tin mediated proteolysis (UBA6, BIRC6, ANAPC1, ...The KEGG pathway ...
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Unveiling transcription factor regulation and differential co-expression genes in Duchenne muscular dystrophy
... the KEGG pathway analysis, aberrantly regulated genes were enriched in immune system path- ways, such as calcium-induced T lymphocyte apoptosis, iCOS-iCOSL signaling in T helper cells, complement system, ...
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Quantitative analysis of differentially expressed proteins in psoriasis vulgaris using tandem mass tags and parallel reaction monitoring
... binding. KEGG pathway enrich- ment analysis revealed significant associations between several pathways and the pathogenesis of PV, including upregulation of the NOD-like receptor pathway, anti- gen ...
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Exosomes derived from Wharton's jelly of human umbilical cord mesenchymal stem cells reduce osteocyte apoptosis in glucocorticoid-induced osteonecrosis of the femoral head in rats via the miR-21-PTEN-AKT signalling pathway
... performed KEGG pathway enrichment analysis, and the AKT signalling pathway was found to be up-regulated when MLO-Y4 cells were cultured with exosomes ...
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The functional cancer map: A systems-level synopsis of genetic deregulation in cancer
... Further use of the functional cancer map was made to calculate tumor phylogeny by laying down new starting points for the efficient combination of tumor therapeu- tics as well as for expanding the application area of ...
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Small mosquitoes, large implications: crowding and starvation affects gene expression and nutrient accumulation in Aedes aegypti
... the KEGG pathway for insect hormone biosynthesis could indicate that juvenile hormone is converted to JH III diol, keeping JH levels higher in small ...
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Bioinformatics analysis of differentially expressed genes in rotator cuff tear patients using microarray data
... Through KEGG pathway results, we discovered that GNG13 acts as an important node in dopaminergic synapse signaling, and targets PLC and AC5 in calcium signaling ...signaling pathway and skeletal ...
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Micro RNA Transcriptome Profile in Canine Oral Melanoma
... KEGG pathway analysis of the target genes of the differentially expressed miRNAs.. miRNA–transcription factor interaction network between dog and human melanoma[r] ...
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Comprehensive and integrative analysis identifies microRNA 106 as a novel non invasive biomarker for detection of gastric cancer
... and KEGG pathway enrichment analysis by separately mapping the target mRNAs of miR-106a and miR-106b to the online tool DAVID (Database for Anno- tation, Visualization, and Integrated Discovery) ...
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RETRACTED ARTICLE: Gene expression profiling analysis of the putamen for the investigation of compensatory mechanisms in Parkinson’s disease
... signaling pathway and phosphatidylinositol signaling system have been demonstrated to be related studies have shown that phosphorylated gap junction protein connexin 43 is selectively enhanced in the basal ganglia ...
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METTL1-mediated m7G methylation maintains pluripotency in human stem cells and limits mesoderm differentiation and vascular development
... thermore, KEGG pathway analysis showed that numer- ous pathways associated with angiogenesis and vasculogenesis were significantly differentially regu- lated ...
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Text mining applied to autoimmune disease research: the Sjögren’s syndrome knowledge base
... Description: To catalog the existing knowledge in the field, we used text mining to generate the Sjögren ’ s Syndrome Knowledge Base (SSKB) of published gene/protein data, which were extracted from PubMed using text ...
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<p>Identification and Bioinformatic Analysis of Circular RNA Expression in Peripheral Blood Mononuclear Cells from Patients with Chronic Obstructive Pulmonary Disease</p>
... The KEGG pathway analysis indicated that these dys- regulated circRNAs might contribute to the development of COPD by affecting the NOD-like receptor signaling pathway, natural killer cell mediated ...
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Identification of potential candidate genes for hypertensive nephropathy based on gene expression profile
... the KEGG pathway enrichment analysis for DEGs in the PPI network was performed based on ...each pathway term was adjusted into the FDR by using Bonferroni correction ...and pathway groups were ...
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<p>Identification of Critical Pathways and Hub Genes in LanCL1-Overexpressed Prostate Cancer Cells</p>
... Figure 1 Differentially expressed genes (DEGs) and functional enrichment results of differentially expressed genes. DEG was determined using the following criteria: | Fold Change (FC) | ≥ 2 and P value <0.05. For ...
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<p>Identification of Key Genes Involved in Diabetic Peripheral Neuropathy Progression and Associated with Pancreatic Cancer</p>
... PC. KEGG path- way analysis showed that the genes correlated with MMP9 were signi fi cantly enriched in cytokine-cytokine receptor interaction, ECM-receptor interaction, hematopoietic cell lineage, B cell receptor ...
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Microarray analysis of peripheral blood lymphocytes from ALS patients and the SAFE detection of the KEGG ALS pathway
... the KEGG ALS pathway (hsa05014) [37] and correspond to 36 protein entities defining unique proteins or protein complexes (Figure ...the KEGG ALS pathway map (pseudogene CASP12 excluded) ...
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SUBTRACTIVE GENOMICS APPROACH FOR IN SILICO IDENTIFICATION OF NOVEL DRUG TARGETS AND EPITOPES FOR VACCINE DESIGN IN TREPONEMA PALLIDUM SUBSP PALLIDUM STR NICHOLS
... metabolic pathway of the membrane bound proteins in Treponema pallidum ...using KEGG Automatic Annotation Server ...(KEGG) pathway database. Unique pathway noted during this analysis is ...
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Proteome analysis of a recombinant Bacillus megaterium strain during heterologous production of a glucosyltransferase
... About 300 relatively highly expressed protein spots were excised from 2-D gels and subjected to the ESI-QqTOF MS/MS analysis. 167 spot were identified as 149 individ- ual proteins, because some proteins appeared as ...
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