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Linkage and Recombination

Haplotype phasing after joint estimation of recombination and linkage disequilibrium in breeding populations

Haplotype phasing after joint estimation of recombination and linkage disequilibrium in breeding populations

... of recombination rates but PHASE [7] ...A linkage program like GENEHUNTER can extract multiple relative’ s information [9], although it is done by assuming linkage equilibrium between polymor- ...

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Estimates of linkage disequilibrium and the recombination parameter determined from segregating nucleotide sites in the alcohol dehydrogenase region of Drosophila pseudoobscura.

Estimates of linkage disequilibrium and the recombination parameter determined from segregating nucleotide sites in the alcohol dehydrogenase region of Drosophila pseudoobscura.

... The heterogeneous estimates of the recombination parameter and the inverse relationship between linkage disequilibrium and nucleotide distance are no longer significant w[r] ...

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Linkage Disequilibrium Patterns Across a Recombination Gradient in African Drosophila melanogaster

Linkage Disequilibrium Patterns Across a Recombination Gradient in African Drosophila melanogaster

... intralocus linkage disequilibrium (LD) in Drosophila melanogaster and ...and recombination rates and observed levels of ...different recombination environments suggests that markers near the telomere ...

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GENETIC LINKAGE IN THE HORSE. II. DISTRIBUTION OF MALE RECOMBINATION ESTIMATES AND THE INFLUENCE OF AGE, BREED AND SEX ON RECOMBINATION FREQUENCY

GENETIC LINKAGE IN THE HORSE. II. DISTRIBUTION OF MALE RECOMBINATION ESTIMATES AND THE INFLUENCE OF AGE, BREED AND SEX ON RECOMBINATION FREQUENCY

... A significant heterogeneity among stallions for the frequency of recombination has been observed in the present study for the K-PGD linkage and previously for the Xk- PH[r] ...

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The Effects of Genotype-Dependent Recombination, and Transmission Asymmetry, on Linkage Disequilibrium

The Effects of Genotype-Dependent Recombination, and Transmission Asymmetry, on Linkage Disequilibrium

... of linkage disequilibrium (C rawford et ...in recombination rates across the human ...all recombination appears to occur in narrow (1- to 2-kb) regions termed recombination ...

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Estimation of recombination frequencies and construction of RFLP linkage maps in plants from crosses between heterozygous parents.

Estimation of recombination frequencies and construction of RFLP linkage maps in plants from crosses between heterozygous parents.

... The construction of a restriction fragment length polymorphism (RFLP) linkage map is based on the estimation of recombination frequencies between genetic loci and on the [r] ...

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A primary linkage map of the porcine genome reveals a low rate of genetic recombination.

A primary linkage map of the porcine genome reveals a low rate of genetic recombination.

... Estimates of the total genome sue in centimorgans: The relationship between recombination and physical distances was investigated by analyzing the observed linkage dist[r] ...

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EFFECTS OF LINKAGE ON PARENTAL-COMBINATION AND RECOMBINATION FREQUENCIES IN F2

EFFECTS OF LINKAGE ON PARENTAL-COMBINATION AND RECOMBINATION FREQUENCIES IN F2

... It has been shown that complete linkage, under the conditions postulated, decreases the Fz recombination variance by only the proportion l/m on the average where m is t[r] ...

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Insights Into Recombination From Patterns of Linkage Disequilibrium in Humans

Insights Into Recombination From Patterns of Linkage Disequilibrium in Humans

... of linkage disequilibrium (LD) between linked markers would facilitate the design of association studies and help to distinguish between evolutionary ...of recombination, a parameter that is difficult to ...

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SELECTION FOR LINKAGE MODIFICATION II. A RECOMBINATION BALANCE FOR NEUTRAL MODIFIERS

SELECTION FOR LINKAGE MODIFICATION II. A RECOMBINATION BALANCE FOR NEUTRAL MODIFIERS

... In the case of evolution of dominance the order of magnitude of selection is the mutation rate at the beginning and the square root of the mutation rate at the conclusion (un[r] ...

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LINKAGE DISEQUILIBRIUM, SELECTION AND RECOMBINATION AT THREE LOCI

LINKAGE DISEQUILIBRIUM, SELECTION AND RECOMBINATION AT THREE LOCI

... Additionally, interactions among three loci are important in reducing the strength of selection necessary to maintain a given level of disequilibrium, relative to a two-[r] ...

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LINKAGE MODIFICATION AND SEX DIFFERENCE IN RECOMBINATION

LINKAGE MODIFICATION AND SEX DIFFERENCE IN RECOMBINATION

... I N a previous paper entitled “Modification of linkage intensity by natural selec- tion,” NEI (1967) showed that linkage intensity may be modified either through structura[r] ...

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Genetic recombination in bacteriophage T4: single-burst analysis of cosegregants and evidence in favor of a splice/patch coupling model.

Genetic recombination in bacteriophage T4: single-burst analysis of cosegregants and evidence in favor of a splice/patch coupling model.

... structures. In that case, as well as in the scheme shown in Figure 7, the replication/recombination linkage is also postulated, and the correlation observed here may argu[r] ...

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RECOMBINATION AND ASSORTMENT IN THE MACRONUCLEUS OF TETRAHYMENA THERMOPHILA: A THEORETICAL STUDY BY COMPUTER SIMULATION

RECOMBINATION AND ASSORTMENT IN THE MACRONUCLEUS OF TETRAHYMENA THERMOPHILA: A THEORETICAL STUDY BY COMPUTER SIMULATION

... We have shown by computer simulation that linkage between macronuclear genes should be experimentally demonstrable by assortment when the fre- quency of recombination [r] ...

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EFFECT OF MATING STRUCTURE ON VARIATION IN LINKAGE DISEQUILIBRIUM

EFFECT OF MATING STRUCTURE ON VARIATION IN LINKAGE DISEQUILIBRIUM

... obtain formulae for the variance of the observed disequilibria as a function of N e , mating structure, n, and linkage o r recombination parameter.-The variance of [r] ...

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Linkage group XIX of Chlamydomonas reinhardtii has a linear map.

Linkage group XIX of Chlamydomonas reinhardtii has a linear map.

... Although we observed changes in recombination frequencies in some intervals on linkage group XIX in crosses to CC-1952, and in strains heterozygous for the mutatio[r] ...

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A General Framework for Statistical Linkage Analysis in Multivalent Tetraploids

A General Framework for Statistical Linkage Analysis in Multivalent Tetraploids

... estimate recombination fraction between partially informative observed gamete mode frequencies for two parents ( f i markers is more difficult to estimate for the same ...

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The Hill–Robertson Effect and the Evolution of Recombination

The Hill–Robertson Effect and the Evolution of Recombination

... O NE of the first general hypotheses proposed to explain the maintenance of sex and recombina- tion states that sex increases the rate of adaptation, by allowing beneficial mutations initially present on dif- ferent ...

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RECOMBINATION DIFFERENCES WITH RECIPROCAL CROSSES IN TRIBOLIUM CASTANEUM

RECOMBINATION DIFFERENCES WITH RECIPROCAL CROSSES IN TRIBOLIUM CASTANEUM

... Contrary to this generalization SOKOLOFF ( 1964) reported that in Tribolium castaneum Herbst recombination between cortain genes of linkage group VI1 was greater in ma[r] ...

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Recombination and its impact on the genome of the haplodiploid parasitoid wasp Nasonia

Recombination and its impact on the genome of the haplodiploid parasitoid wasp Nasonia

... meiotic recombination occurs in most sexually reproducing organisms, yet its evolutionary advantages are ...explored recombination in the honeybee, a eusocial hymenopteran with an exceptionally high ...

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