linkage mapping
The Role of Pedigree Information in Combined Linkage Disequilibrium and Linkage Mapping of Quantitative Trait Loci in a General Complex Pedigree
... Combined linkage disequilibrium and linkage (LDL) mapping can exploit historical as well as recent and observed recombinations in a recorded ...LDL mapping and the performance of LDL ...
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Linkage mapping for complex traits : a regression-based approach
... gene mapping may be split into two ...’positional mapping’ approach requires, in principle, no prior biological knowl- edge but its purpose is perhaps less ambitious: it aims at identifying chromosomal ...
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Linkage Mapping of 1454 New Maize Candidate Gene Loci
... physical mapping has been under- from multiple crosses (Davis et ...Maize Mapping Project (MMP; http:// ...gene mapping programs are very useful The IBM2 map was used to pool loci from several other ...
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Linkage Mapping in Experimental Crosses: The Robustness of Single-Gene Models
... This issue has not been extensively inves- tigated in the experimental breeding setting, although some robustness is implicitly assumed in the common practice of estimating[r] ...
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Sheep linkage mapping: nineteen linkage groups derived from the analysis of paternal half-sib families.
... The disadvantage associated with the use of half-sib families in which the mothers are not collected and genotyped is that there is no linkage information ob- tained[r] ...
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Improvement of Mapping Accuracy by Unifying Linkage and Association Analysis
... conventional linkage analysis that assumes linkage equilibrium or family-based association tests (FBATs) capture only partial information, leading to ...tight linkage in the case where no allelic ...
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Development of a Genetic Linkage Map in Abies nordmanniana Accession 9M
... Genetic linkage maps are a tool that have been used in many species of plants and animals to study the organization of genomes (Neale & Williams, ...Genetic linkage mapping involves the placement ...
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Simultaneous Fine Mapping of Multiple Closely Linked Quantitative Trait Loci Using Combined Linkage Disequilibrium and Linkage With a General Pedigree
... pedigree-based linkage mapping (L ander and B otstein 1989; H aley and K nott 1992; A ndersson et ...of linkage disequilibrium (LD) information and positioning of a QTL within a few centimorgans, ...
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Development and characterization of microsatellite markers for Solen grandis using Illumina sequencing approach.
... association mapping, genetic linkage mapping, and population and evolution analysis owing to their advantages such as hyper- variability, reproducibility, co-dominant inheritance, and extensive ...
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A genetic and physical mapping study of the retinitis pigmentosa critical region on the proximal short arm of the X chromosome
... achieved, linkage disequilibrium between the disease and linked DNA markers may further localise the defective ...to linkage mapping, linkage disequilibrium mapping attempts to glean ...
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Physical Mapping of the liguleless Linkage Group in Sorghum bicolor Using Rice RFLP-Selected Sorghum BACs
... Physical mapping placed the sorghum BACs in the and ...by linkage mapping of the RZ467 screened clone, did not cohybridize with 88C12 BAC end clones in ...Physical mapping to seen in rice ...
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Linkage Disequilibrium and the Mapping of Human Disease Genes
... Genetic linkage analysis is a statistical method that is used to associate functionality of genes to their location on ...efficient linkage mapping of disease ...Association mapping is ...
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Distribution of genome-wide linkage disequilibrium based on microsatellite loci in the Samoan population
... PRISM linkage mapping set version 2, consisting of 400 microsatellite markers, with fluorescently labelled primers, spaced at an average 10 cM distance between ...
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Kermit: linkage map guided long read assembly
... denser linkage maps than ...for linkage map construction for such dense data sets [5]. Dense linkage maps have been constructed for several recently sequenced genomes, including ...enough ...
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Linkage Disequilibrium Mapping of Arabidopsis CRY2 Flowering Time Alleles
... identified, linkage disequilibrium the associations that show significantly earlier flowering mapping suggests that the locus responsible is localized for accessions containing HAP ...
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Association mapping to dissect and exploit existing natural variation for crop improvement
... environment. Linkage analysis and association mapping are the two most commonly used tools for dissecting genetic basis of complex ...traits. Linkage analysis in plants typically localizes QTLs to 10 ...
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Mapping Three Classical Isozyme Loci in Tetrahymena: Meiotic Linkage of EstA to the ChxA Linkage Group
... To test EstA and AcpA for linkage to known RAPD loci on their respective chromosomes, a panel of Round I1 (genomic exclusion) segregants from a B/C3 heterozygote was u[r] ...
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A survey of data mining methods for linkage disequilibrium mapping
... Clustering aims to locate relatively homogeneous subgroups in the given data. In the context of LD mapping, clustering of study subjects has been suggested as an approach for finding subgroups of individuals who ...
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An Extended Genetic Linkage Map for Watermelon Based on a Testcross and a BC2F2 Population
... for linkage, and recombination fractions were converted into map distances (centimorgans, cM) with the Kosambi ...final mapping of linkage groups following removal of loci showing weak or suspect ...
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Extent of genome-wide linkage disequilibrium in Australian Holstein-Friesian cattle based on a high-density SNP panel
... of linkage disequilibrium (LD) within a population determines the number of markers that will be required for successful association mapping and marker-assisted ...
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