Pairwise divergence between ITS region sequences from 13
Evaluation of intra- and interspecific divergence of satellite DNA sequences by nucleotide frequency calculation and pairwise sequence comparison
... DNA sequences are known to be highly variable and to have been subjected to concerted evolution that homogenizes member sequences within ...DNA sequences in four fishes from the genus Diplodus ...
6
Incorporating regional context into pairwise alignments of biological sequences
... is because, as mentioned earlier, we do not expect insertions to have more than one gap. Levels in column 3 are also very low as expected since sequence pairs are made from close homologues. All third levels in ...
153
Divergence Between the Drosophila pseudoobscura and D. persimilis Genome Sequences in Relation to Chromosomal Inversions
... differentiation between the two genome sequences in pericen- tromeric and peritelomeric ...correlation between levels of variation and local recombination rate observed within ...far from the ...
12
Between-region genetic divergence reflects the mode and tempo of tumor evolution.
... data from colorectal adenocarcinomas sampled from two regions (COAD, taken >3 cm apart) 15 with high purity (72-96%) and adequate coverage (80-120X median WES depth) (Supplementary Figures ...SSNVs ...
27
Likelihoods From Summary Statistics: Recent Divergence Between Species
... noncoding region tightly linked to a paracentric inversion that strongly contributes to reproductive ...nucleotide sequences permits a compact description of the genealogy of the ...determined from a ...
18
Divergence of the Hyperthermophilic Archaea Pyrococcus furiosus and P. horikoshii Inferred From Complete Genomic Sequences
... in its topoisomerase domain, which is common between P. results belie the notion that organisms such as Pyrococ- horikoshii and M. jannaschii. The adjacent topoisomerase gene cus are somehow “frozen” ...
8
Phellinus noxius: molecular diversity among isolates from Taiwan and its phylogenetic relationship with other species of Phellinus based on sequences of the ITS region
... The ITS sequences of 58 isolates belonging to 39 species of Phellinus retrieved from GenBank and seven ...of ITS sequences from Taiwan were used in the analysis of the ...
11
Genetic Divergence between Auxis thazard and A. rochei based on PCRRFLP Analysis of mtDNA D-loop Region
... values obtained for Tajima’s D test suggest that control region (D-loop) sequences in studied samples are not under selection. The putative time of population expansion was estimated from the tau (τ) ...
8
Coding region structural heterogeneity and turnover of transcription start sites contribute to divergence in expression between duplicate genes
... regulatory sequences and include additional sequences at each side (for example, poly(A) tails at 3' terminus and short direct repeats at both termini), so that retrotransposed copies differ from the ...
12
Venezuelan Equine Encephalomyelitis Virus Structure and Its Divergence from Old World Alphaviruses
... calculated between each section and the same section rotated 120° about the normal axis of ...outwards from the envelope skirt ...ing region of VEE ...
6
Meiotic Consequences of Genetic Divergence Across the Murine Pseudoautosomal Region
... pseudoautosomal region (PAR), a short region of near-perfect sequence homology between the X and Y ...Despite its established importance for meiosis, the PAR is rapidly evolving, raising the ...
12
Novel Polymorphic Region of the rpoB Gene Containing Mycobacterium Species Specific Sequences and Its Use in Identification of Mycobacteria
... the sequences of M. kansasii are dif- ferent from those of ...polymorphic sequences were different even between highly closely related species, such as ...the sequences of this ...
6
Perception-Oriented Prominent Region Detection in Video Sequences
... video sequences is an important yet challenging task for video retrieval and ...prominent region detection from the viewpoint of the human perception intending to construct a good pattern for content ...
8
Strong convergence of pairwise NQD random sequences
... of pairwise NQD random sequences have been ...of pairwise NQD sequences and generalizes partial results of Wu ...of pairwise NQD random sequences, Acta ...NQD sequences ...
7
DIVERGENCE OF RIBOSOMAL RNA SEQUENCES WITHIN ANGIOSPERMAE
... Ribosomal RNA’s have been isolated from leaves of barley, wheat, cotton, and pumpkin and are characterized by four optical density peaks with polyacrylamide gel electrophoresis.-On [r] ...
17
A note on the complete convergence for sequences of pairwise NQD random variables
... The concept of NQD random variables was introduced by Lehmann [1]. Definition 1.1 [1] Two random variables X and Y are said to be NQD random vari- ables if for any x, y Î R, P(X < x, Y < y) ≤ P(X < x)P(Y < y). (1 : 1) A ...
8
Some convergence properties for weighted sums of pairwise NQD sequences
... Full list of author information is available at the end of the article Abstract Some properties for pairwise NQD sequences are discussed. Some strong convergence results for weighted sums of pairwise ...
8
Molecular characterization of cereal cyst nematodes from the South Anatolian Region in Turkey using ITS-rDNA sequences
... For identification purposes, an alignment using ClustalX 2.0 (Thompson et al., 1997) was constructed of all our sequences, together with representatives of all species of the H. avenae group, plus some other ...
10
KISSa: a strategy to build multiple sequence alignments from pairwise comparisons of very closely related sequences
... is its dependency on the use of sequences that are highly similar, although it does function with different genotypes of a virus species such as dengue ...format sequences that have 1) minor ...
6
Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations.
... We will be concerned with two re- lated questions: first, is it possible to use the sample distribution of pairwise differences in DNA sequence to test the hypothesis [r] ...
8