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RMSD with respect to the reference structure

The difficulty of protein structure alignment under the RMSD

The difficulty of protein structure alignment under the RMSD

... the RMSD in linear time [26], it is natural to ask if the difficulty in LCP or MAD lies solely in the combinatorial complexity of finding the opti- mal subsets, ...

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Organization of forest services : their sociology and structure with respect to change

Organization of forest services : their sociology and structure with respect to change

... research result application varied between the state forest services, and that the strong centralized control of the Queensland Forest Service appeared to facilitate[r] ...

149

Feasibility study of Green Buildings with respect to Conventional Structure

Feasibility study of Green Buildings with respect to Conventional Structure

... The electricity charges for 3 years will be around ₹4,32,000/- Minimization with the help of materials: 1. Bricks: - Use of eco-friendly materials can lead to huge savings as they are purpose made. For example, use of ...

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A New Multi-Objective Approach for Molecular Docking Based on RMSD and Binding Energy

A New Multi-Objective Approach for Molecular Docking Based on RMSD and Binding Energy

... global reference front are plotted with different points and ...the RMSD objective, whereas MOEA/D generate non-dominated solutions in a different region to the ones of SMPSO, thereby giving cue to the ...

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Brown coal char CO2-gasification kinetics with respect to the char structure

Brown coal char CO2-gasification kinetics with respect to the char structure

... CHAPTER 4 Results and Discussions 71 Fig. 4.20 Profiles of N 2 adsorption isotherms derived for partially gasified samples of Char 2 As it has been established, physical structure of the initial samples of Char 2 ...

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Statistical analysis of characteristics of Infant-Directed-Interaction with respect to action structure

Statistical analysis of characteristics of Infant-Directed-Interaction with respect to action structure

... Another approach would be to divide the actions into subactions like grasping, showing, inserting, and not in segments Beg-End, but this would be too fine-grained for my analysis and would not serve to analyse the ...

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Optimal Investment Portfolio with Respect to the Term Structure of the Risk-Return Tradeoff

Optimal Investment Portfolio with Respect to the Term Structure of the Risk-Return Tradeoff

... Section 2.1. suggested the solution for portfolio selection problem that is convenient for short horizon investor. However since the work of Merton (1969, 1971, 1973) and Samuelson (1969) the solution to a portfolio ...

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Vibrational properties of harp soundboard with respect to its multi-layered structure

Vibrational properties of harp soundboard with respect to its multi-layered structure

... Received: 11 October 2011 / Accepted: 6 February 2012 / Published online: 23 February 2012 Ó The Japan Wood Research Society 2012 Abstract The vibrational properties of a harp soundboard were investigated with ...

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CORE VALUES: INTEGRITY, PROFESSIONALISM, RESPECT FOR DIVERSITY CONSULTANCY ANNOUNCEMENT TERMS OF REFERENCE

CORE VALUES: INTEGRITY, PROFESSIONALISM, RESPECT FOR DIVERSITY CONSULTANCY ANNOUNCEMENT TERMS OF REFERENCE

... Quick Reference Guide for first responders on the identification of GBV of rescued trafficking in persons and smuggled migrant victims (Deliverable A and ...

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Questionnaire on Information Structure (QUIS): reference manual

Questionnaire on Information Structure (QUIS): reference manual

... 7 Acknowledgments We have collaborated with a number of experts in the development of the various components of this manual. For the elaboration of the general questions (Chapter 2), we would like to mention Joanna ...

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Position and Perspectives of Small Farms with Respect to the Structure Development of Subsequent Vertical Link

Position and Perspectives of Small Farms with Respect to the Structure Development of Subsequent Vertical Link

... DISCUSSION Structure development characteristics of food processors within selected commodity chains For analysis there were chosen two sectors of food processing in the Czech Republic, that are rather different ...

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Smallmouth Bass Habitat Use and Movement Patterns with Respect to Reservoir Thermal Structure

Smallmouth Bass Habitat Use and Movement Patterns with Respect to Reservoir Thermal Structure

... The companion laboratory experiments (Bevelhimer 1996) demonstrated the relative importance of some factors in- volved in habitat selection by smallmouth bass; both cover and food affect[r] ...
De-coupling   Criteria with Respect to Structural Response of a Nuclear Power Plant Structure

De-coupling Criteria with Respect to Structural Response of a Nuclear Power Plant Structure

... To review these aspects, an attempt has been made to study the structural response of calandria vault (CV) supporting the calandria endshield assembly (CEA) of pressurized heavy [r] ...

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CHROMOSOME STRUCTURE IN THE ACRIDIDAE WITH SPECIAL REFERENCE TO THE X CHROMOSOME

CHROMOSOME STRUCTURE IN THE ACRIDIDAE WITH SPECIAL REFERENCE TO THE X CHROMOSOME

... WHITE (1940) has already considered the possibility of the presence of a minor spiral to account for the greater thickness of the X chromosome as compared with [r] ...

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Reference-dependent analysis of capital structure and REIT performance

Reference-dependent analysis of capital structure and REIT performance

... capital structure and REIT performance will benefit all stakeholders ...capital structure determinants (Alcock, Steiner, & Tan, 2014; Ertugrul & Giambona, 2010; Harrison, Panasian, & Seiler, ...

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Combining Predicate Argument Structure and Operator Projection: Clause Structure in Role and Reference Grammar

Combining Predicate Argument Structure and Operator Projection: Clause Structure in Role and Reference Grammar

... and Reference Grammar (Foley and Van Valin, 1984; Van Valin, ...stituent structure that is interleaved with an opera- tor projection which reflects the scopal properties of functional ...constituency ...

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Challenges in Finding an Appropriate Multi-Dimensional Index Structure with Respect to Specific Use Cases

Challenges in Finding an Appropriate Multi-Dimensional Index Structure with Respect to Specific Use Cases

... 4.3 Test Environment Simulator Existing index structures are created with respect to dif- ferent optimization criteria. As already mentioned, the VA- File is optimized for reducing disk accesses. Consequently, ...

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GPU Q J, a fast method for calculating root mean square deviation (RMSD) after optimal superposition

GPU Q J, a fast method for calculating root mean square deviation (RMSD) after optimal superposition

... The CPU scored 1.3 GFLOPS in double precision multi- plication and addition.using flops.c [16] as a benchmark. Software environment The ATI SDK 1.4 provides Brook+ [17] as a high level language to interface with its ...

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Focus Structure in Biblical Hebrew: A Study of Word Order and Information Structure with Special Reference to Deuteronomy.

Focus Structure in Biblical Hebrew: A Study of Word Order and Information Structure with Special Reference to Deuteronomy.

... clause study may be understandable, because the majority of verbal clauses take the sequence of VX. However, as we have seen in the nominal clause, the minority in number does not ne[r] ...

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Inhibitory effects and structure-activity relationship of flavonoids with respect to human organic aniontransporting polypeptides, OATP2B1

Inhibitory effects and structure-activity relationship of flavonoids with respect to human organic aniontransporting polypeptides, OATP2B1

... When plant-based supplements containing flavonoids are consumed, the flavonoids can have undesirable effects, particularly in the gastrointestinal tract, where they are present in high concentration. Small intestine ...

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