Selection indices using phenotypic data (160W, FES and YW) and SNP
Testing Natural Selection vs. Genetic Drift in Phenotypic Evolution Using Quantitative Trait Locus Data
... diver- phenotypic difference separating two taxa, the number gence, the tall line happened to accumulate a few more of QTL, and the approximate distribution of QTL ef- plus than minus factors by genetic ...
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Searching for Footprints of Positive Selection in Whole-Genome SNP Data From Nonequilibrium Populations
... chromosomes using a multitude of comparisons between neutral and selective hypotheses, such as selection or neutrality in equilibrium and nonequilibrium populations and recurrent selection ...testing ...
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Modulated Data Transmission Using Antenna Indices and Their Combinations
... Combined use of long error correction codes and perfect decoding. All the conditions led to the development of transmission strategies ,space time coding (STC) and spatial Modulation[4]. In the first multielement antenna ...
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Optimal Use Of Phenotypic Data For Breeding Using Genomic Predictions
... built using the complete dataset, suggesting that environment-specific QTL for responses to specific abiotic or biotic stresses that affected overall model accuracy were ...environments using their ...
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Comparison of selection indices using different weights for biometrical characters in bajra crop
... The data on different biometrical characters of large scale varietal trial having 21 genotypes of bajra were collected from regional research station, Anand for present ...The selection index technique was ...
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Integrating fMRI and SNP data for biomarker identification for schizophrenia with a sparse representation based variable selection method
... variable selection (SRVS) method, and applied it to an integrative analysis of SNP data and fMRI ...imaging data (e.g. fMRI data) or genomic data (e.g. SNP data), ...
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The genetic heritage of Alpine local cattle breeds using genomic SNP data
... present in this region, has allowed us to expand knowl- edge on the evaluation and status of Alpine cattle diver- sity. Indeed, an important prerogative in conservation genetics and genetic improvement of breeds should ...
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Calculating spatial urban sprawl indices using open data
... truth data for assessing urban sprawl, there exists no methodology for validating sprawling ...compute indices for both sprawled and compact ...This selection allows us to test distinct attributes of ...
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Selection indices in groundnut (Arachis hypogaea L.)
... direct selection is not much effective on ...simultaneous selection based on related traits (Bos and Caligri, ...done using selection index, which is multiple regressions of genotypic values ...
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The effect of mislabeled phenotypic status on the identification of mutation carriers from SNP genotypes in dairy cattle
... The selection of an appropriate kernel function is how- ever important, since it defines the transformed feature space in which the training set instances will be ...the data, though, the abil- ity of SVMR ...
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YW (Yagi for Windows)
... shown. YW will internally convert the unit of measurement to inches, but will only display output in inches or mm, as selected by the ...exiting YW and then editing the file with an ASCII (text) word ...
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Tag SNP Selection for Association Studies
... that using a haplotype discovery panel for which SNPs have been genotyped at approxi- mately a 5-kb density appears to provide a basis for the detection of the influence of a single common unmeasured variant ...
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Using penalized regression to predict phenotype from SNP data
... The strength of the penalty is controlled by a regularization parameter that determines the amount of shrinkage imposed. One challenge of penalized ap- proaches is choosing an optimal value of the regularization ...
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Selection for a behavior, and the phenotypic traits that follow
... If this is so, it may explain certain patterns we see in nature. For example, weasels, foxes, hares, and lemmings DUH SUHVXPDEO\ DOO IURP GLIIHUHQW FUHDWHG NLQGV (DFK has species adapted to the Arctic climate ...
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Phenotypic selection for photosynthetic capacity and efficiency
... At Rothamsted, UK, under the BBSRC-funded projects 20:20 Wheat® and CIRC BB/I017372/1, photosynthetic capacity and efficiency was measured for 64 lines in the ERYCC (Earliness & Resilience for Yield in a Changed ...
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SELECTION INDICES FOR HIGH YIELD IN SUGARCANE
... Stalk weight and millable stalks per stool were closely associated with high tons cane per hectare and explained most of the variance in sugar yield among the tonnage yield[r] ...
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Phenotypic selection in common toad (Bufo bufo)
... directional selection was detected for some of the characters, analysis of directional gradients failed to reveal significant direct effects in either ...between selection differentials and gradients is not ...
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Bis SNP: Combined DNA methylation and SNP calling for Bisulfite seq data
... bisulfite-seq data, because true C>T sequencing errors can not be identified when the underlying methyla- tion state of each bisulfite-converted DNA fragment is ...
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Deciphering clonality in aneuploid breast tumors using SNP array and sequencing data
... used SNP arrays to derive segmented CN data for the RESPONSIFY ...whereas SNP arrays usually require frozen tissue, which is less practical to ...from SNP arrays or sequencing ...or SNP ...
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SNP set analysis for detecting disease association using exon sequence data
... Background High-throughput sequencing technologies have been evolving extraordinarily fast in the past few years. They have been recently applied to genome-wide association studies to study the effects of both common and ...
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