Sequence comparison using the ConSurf program
Sequence-specific sequence comparison using pairwise statistical significance
... a comparison is valid in this case since all the methods compared on a single plot have exactly same saturated queries at different coverage ...this comparison methodology would not have been ...
126
Parallelization of Weighted Sequence Comparison by using EBWT
... The distance we define takes into account such kind of modifications and therefore it can be successfully applied to compare genomic sequences. The new notion used to measure distance between two sequences is based on ...
Alignment-free sequence comparison using absent words
... Abstract Sequence comparison is a prerequisite to virtually all comparative genomic ...by sequence alignment techniques, which are computationally ...some sequence if it does not occur in the ...
16
Alignment-free sequence comparison using absent words
... Abstract Sequence comparison is a prerequisite to virtually all comparative genomic ...by sequence alignment techniques, which are computationally ...some sequence if it does not occur in the ...
15
Program to evaluate microbial communities using sequence data
... # This R script performs statistical analyses using sequence data. It goes through all the steps # from reading the data into R, merging multiple datasets, calculating diversity metrics, # performing ...
18
A COMPARISON OF COMPUTATION TECHNIQUES FOR DNA SEQUENCE COMPARISON
... a comparison survey done on DNA sequence comparison ...sequential comparison, multithreading on a single computer and multithreading using parallel ...biological sequence ...
6
Linear-Time Sequence Comparison Using Minimal Absent Words & Applications
... Abstract. Sequence comparison is a prerequisite to virtually all com- parative genomic ...by sequence alignment techniques, which are computationally ...some sequence if it does not occur in ...
14
PERFORMANCE AND COMPARISON OF LINEAR MULTIUSER DETECTORS IN DS-CDMA USING CHAOTIC SEQUENCE
... INTERNATIONAL JOURNAL OF ADVANCES IN ENGINEERING RESEARCH well-known, even though completely deterministic and initial sensitive, have characteristics similar to those of random noise. Surprisingly, the maps can generate ...
15
Representation Learning For Sequence And Comparison Data
... To collect a dataset of playlists for our empirical evaluation, we crawled Yes.com during the period from Dec. 2010 to May 2011. Yes.com is a website that provides radio playlists of hundreds of stations in the United ...
154
Circular sequence comparison: algorithms and applications
... We use a sliding window of length m to maintain the above information. When the window is shifted one position to the right, we have to add to the difference- vector diff the previous first element of the window, and ...
14
Genetic comparison of different human population groups using internal transcribed spacer sequence
... 4.4 The data of Primers (For &Rev) from 1 st Base Company 37 4.5 The results of purified PCR products of ITS1 gene 39 4.6 The results of purified PCR products of NADH1 gene 40 4.7 The percentage identity results of ITS1 ...
22
Benchmarking of alignment free sequence comparison methods
... all-versus-all sequence comparisons need to be ...recommend using other web-based benchmarking services developed for these purposes [64, ...any sequence comparison tool—not necessarily ...
18
Condensed Matrix Descriptor for Protein Sequence Comparison
... Protein Sequence using condensed matrices that are based on average distances for pairs of bases obtained as quotients of sequential numbers and serial numbers in pri- mary ...protein sequence but ...
13
Improving performance of program by finding good optimal sequences using sequence selection approach
... optimization sequence exploration technique [20, 21, 22, 23] (OSE) as first iterative compilation model for general purpose compilers to overcome the problem in predictive ...technique program evaluations ...
8
Comparison Between Mealy and Moore State Models Using Sequence Detector with VHDL Coding Techniques
... the sequence detector ...by using Multisim to predict output timing results of these design ...by using Modelsim software to achieve the output timing ...of sequence detector has a simplified ...
6
iPBA: a tool for protein structure comparison using sequence alignment strategies.: Structural Alphabet Alignment
... generated using iPBA has the least ...systematic comparison using the standalone version of iPBA, the alignments were found to be better than DALI and MUSTANG in >80% of the ...
8
Comparison of Apical Extrusion of Debris by Using Single-File, Full-Sequence Rotary and Reciprocating Systems
... with a method similar to that used in previous studies (n=20) [10,11]. Root canal cleaning and shaping: An operator experienced in using full-sequence rotary and reciprocating systems prepared all the ...
6
SLOPE STABILITY ANALYSIS USING SLOPEEX PROGRAM IN COMPARISON WITH COMMERCIAL SOFTWARE
... *Corresponding author : [email protected] Abstract Slope stability analysis is routinely performed to assess the safe design of man-made soil slopes such as embankments, road cuts, open-pit mining, excavations, ...
6
Non sentential Question Resolution using Sequence to Sequence Learning
... Table 7: BLEU score on a held out set of 400. V refers to vocabulary size 6.4 Experiments Section 3.1 highlighted that RNN encoder decoder model parameters are dominated by the size of vo- cabulary |V |, which can make ...
10
Highly Effective Arabic Diacritization using Sequence to Sequence Modeling
... 4: Comparison to other systems for full diacriti- zation (Darwish et ...OOVs. Using char- acters instead alleviated the OOV ...results. Using voting lowered WER rate further, leading to a ...
6