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target prediction

Accelerating MicroRNA Target Prediction Using Multithreading

Accelerating MicroRNA Target Prediction Using Multithreading

... positive target sequences ...the prediction of miRNA targets in ...miRNA target gene interactions detected by an algorithm as being true ...miRNA target prediction are similar [36]. ...

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mirMark: a site level and UTR level classifier for miRNA target prediction

mirMark: a site level and UTR level classifier for miRNA target prediction

... Currently, a variety of tools have been proposed for miRNA target prediction, based on different methodologies. Among them, TargetScan is a popular method that removes the free energy component and looks ...

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Improving chemical similarity ensemble approach in target prediction

Improving chemical similarity ensemble approach in target prediction

... In this work, we tested different aspects of SEA mod- els, with the purpose of improving the accuracy rate of an SEA, indicating the activity threshold selection and the use of class-specific sets. The results showed ...

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Imbalanced target prediction with pattern discovery on clinical data repositories

Imbalanced target prediction with pattern discovery on clinical data repositories

... of prediction targets of major clinical importance, such as bleeding after percu- taneous coronary intervention (PCI) [4], or cardiac death ...for prediction (classification) are not designed to handle such ...

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Crispr/Cas9 Target Prediction with Deep Learning

Crispr/Cas9 Target Prediction with Deep Learning

... on target estimated chromosome and its coordinate, sgRNA sequence with ...on target prediction score, off target prediction gene which has the greatest CFD score, the chromosome on ...

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Optimal Sleep Schedule And Directional Target Prediction In Wireless Sensor Networks

Optimal Sleep Schedule And Directional Target Prediction In Wireless Sensor Networks

... Probability-based Prediction and Sleep Scheduling protocol (PPSS) to improve energy efficiency of proactive wake ...Directional Target Prediction scheme (OSS-DTP) to improve tracking performance of ...

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A multi-label approach to target prediction taking ligand promiscuity into account

A multi-label approach to target prediction taking ligand promiscuity into account

... based target prediction problem as a multi-label multi- class classification ...Since target proteins/classes are not necessarily mutually exclusive in the case of |Y| ≥ 2, a lone multi-label ...

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Multi-target Prediction Methods for Bioinformatics: Approaches for Protein Function Prediction and Candidate Discovery for Gene Regulatory Network Expansion

Multi-target Prediction Methods for Bioinformatics: Approaches for Protein Function Prediction and Candidate Discovery for Gene Regulatory Network Expansion

... whole target hierarchy: leaf-terms have learned weights and are directly predicted, while inner nodes are predicted by combining the leaf-term scores by means of the max function or ...the prediction for ...

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A scoring matrix approach to detecting miRNA target sites

A scoring matrix approach to detecting miRNA target sites

... miRNA target prediction systems have imple- mented post-processing steps in order to increase their ...of target sites. Here target sites that appear not to be conserved between mul- tiple ...

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Host virus interaction: a new role for microRNAs

Host virus interaction: a new role for microRNAs

... can target critical genes involved in ...microRNA target prediction software revealed that the target genes are involved in apoptosis and tumor suppressor pathways, suggesting that EBV encoded ...

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Heterogeneous network propagation for herb target identification

Heterogeneous network propagation for herb target identification

... of prediction approaches based on network propagation have been widely applied to identify genetic associations, ...drug target identification, PRINCE [15], pgWalk [16] and Know-GENE [17] for dis- ease gene ...

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Correlation of microRNA levels during hypoxia with predicted target mRNAs through genome-wide microarray analysis

Correlation of microRNA levels during hypoxia with predicted target mRNAs through genome-wide microarray analysis

... The lack of a significant and robust correspondence between mRNA levels and miRNA expression could repre- sent a lack of specificity and/or accuracy of miRanda or other target prediction algorithms. The ...

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A New Model for Predicting the Probability of Product Return in Online Shopping

A New Model for Predicting the Probability of Product Return in Online Shopping

... the ensemble method was used to combine these three algorithms. There are multiple methods to combine the results of these algorithms. The method used in the present study is the reliability-based weighting (SRBW) ...

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PREDICTION OF ACADEMIC ACHIEVEMENT BASED ON GOAL SETTING, SELF – EFFICACY AND SELF – ESTEEM AMONG HIGH SCHOOL GIRLSFirooze Firooz far and  Dr. Aminallah Fazel*DOWNLOAD/VIEW

PREDICTION OF ACADEMIC ACHIEVEMENT BASED ON GOAL SETTING, SELF – EFFICACY AND SELF – ESTEEM AMONG HIGH SCHOOL GIRLSFirooze Firooz far and Dr. Aminallah Fazel*DOWNLOAD/VIEW

... This article is extracted from my thesis under the title of “Prediction of academic achievement based on Goal Setting, Self – Efficacy and Self – Esteem Among High School Girls”. Hereby, I extend my sincere ...

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Predictive saccade in the absence of smooth pursuit: interception of moving targets in the archer fish

Predictive saccade in the absence of smooth pursuit: interception of moving targets in the archer fish

... The target appeared on the monitor above the fish’s head ...the target and moved towards the surface in order to shoot at ...the target moved forward ...

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Similarity based learning method for drug target interaction prediction

Similarity based learning method for drug target interaction prediction

... The study of molecular biology through analysis of bio-molecular networks has been fundamental in leading scientists and researchers venture deep in understanding the natural and chemical sciences at the molecular level. ...

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Agora: A Knowledge Marketplace for Machine Learning

Agora: A Knowledge Marketplace for Machine Learning

... Sometimes, data are already shared, but in the raw state and having almost no value. Gov- ernments, for example, are huge data generators. The Gov 2.0 movement has created a new level of data transparency to attract ...

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Rational improvement of the engineered isobutanol-producing Bacillus subtilis by elementary mode analysis

Rational improvement of the engineered isobutanol-producing Bacillus subtilis by elementary mode analysis

... batch and fed-batch fermentations (Table 2 and Figure 5). However, the maximal isobutanol yield of BSUL05 obtained in the present work (0.36 ± 0.02 C-mol/C-mol) was 39 % lower than the in silico prediction (0.59 ...

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Drug-Target Interaction Networks Prediction Using Short-linear Motifs

Drug-Target Interaction Networks Prediction Using Short-linear Motifs

... and selection preference is from high to low. To make it much fairer, we choose the same number of non-interacted proteins as target ones for every drug to maintain the same degree in positive and negative data. ...

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Target and Tissue Selectivity Prediction by Integrated Mechanistic Pharmacokinetic-Target Binding and Quantitative Structure Activity Modeling

Target and Tissue Selectivity Prediction by Integrated Mechanistic Pharmacokinetic-Target Binding and Quantitative Structure Activity Modeling

... binding prediction and phar- macokinetic modeling allows for the prediction of the selectivity profile for a given ligand directly from its molecular ...the target system for CB1- mediated therapies ...

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