TATA box
Substitution of a TATA box from a herpes simplex virus late gene in the viral thymidine kinase promoter alters ICP4 inducibility but not temporal expression.
... A set of recombinant viruses was constructed such that expression of an HSV-1 early gene, thymidine kinase tk, was placed under the control of either the tk TATA box or the TATA box from[r] ...
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A novel HIV 1 encoded microRNA enhances its viral replication by targeting the TATA box region
... In this report, we found that a novel HIV-1-encoded miRNA could upregulate its viral transcription by target- ing the TATA box in the 5 ′ LTR. Several studies have re- vealed that small non-coding RNAs ...
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MiRNAs regulate oxidative stress related genes via binding to the 3′ UTR and TATA-box regions: a new hypothesis for cataract pathogenesis
... the TATA-box regions of ...the TATA-box regions of anti-oxidative genes, whilst the two up-regulated miRNAs could target the TATA-box regions of pro-oxidative genes (Table ...the ...
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Overlapping initiator and TATA box functions in the basal core promoter of hepatitis B virus.
... the TATA box positions the transcription start site by nucleating the formation of a preinitiation complex containing RNA polymerase holoenzyme plus several general transcrip- tion factors (reviewed in ...
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The human cytomegalovirus 80-kilodalton but not the 72-kilodalton immediate-early protein transactivates heterologous promoters in a TATA box-dependent mechanism and interacts directly with TFIID.
... 7 The Human Cytomegalovirus 80-Kilodalton but Not the 72-Kilodalton Immediate-Early Protein Transactivates Heterologous Promoters in a TATA Box-Dependent Mechanism and Interacts Directly[r] ...
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A Functionally Distinct TATA Box Required for Late Progression through the Epstein-Barr Virus Life Cycle
... unique TATA box, independently of upstream or downstream ...the TATA box and downstream of 16 relative to the transcriptional start site) had no conse- quence for either the replication ...
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Concentrations of TATA box binding protein (TBP) type genes affect chordamesodermal gene expression
... was increased with depending on the dose of TBP-MO, and showed the same level with increasing doses of TBP over- expression (Fig. 2A). These results indicate that an appropriate low-concentration of TBP increases ...
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Activin A induces ovine follicle stimulating hormone beta using -169/-58 bp of its promoter and a simple TATA box
... minimal TATA box promoter Figure 4 (Rep 7) shows that synthetically changing the 22 bp between the ovine TATA box and transcription start site of wild type ovine FSHBLuc did not alter activin ...
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TATA box-binding protein-related factor 3 drives the mesendoderm specification of human embryonic stem cells by globally interacting with the TATA box of key mesendodermal genes
... the TATA box site; (iii) the mean peak count- ing frequency flanking TSS (Additional file 7: Figure S4a) is similar to the TBP ChIP data reported previously [36, 40]; (iv) the genome browser screenshots of ...
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Stabilized Binding of TBP to the TATA Box of Herpes Simplex Virus Type 1 Early (tk) and Late (gC) Promoters by TFIIA and ICP4
... the TATA box in the absence of a functional ...the TATA box may differ and may require the presence of a functional INR ...the TATA box, the INR-mutated late gC8 promoter was ...
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Different Mechanisms Regulate Productive Herpes Simplex Virus 1 (HSV-1) and HSV-2 Infections in Adult Trigeminal Neurons
... Mapping regulatory domains in LAT regions. We next used previously characterized HSV-2/HSV-1 chimeras (P1, S1, and E1) containing HSV-1 (17 ⫹ ) LAT regions in an HSV-2 (333) back- ground (Fig. 3B) (4, 13) to map ...
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Mechanism of selective recruitment of RNA polymerases II and III to snRNA gene promoters.
... TBP is required for Pol II transcription from SNAPc-depen- dent promoters, but our results indicate that it is not re- cruited as a preformed TBP – TFIIB complex. In Pol III snRNA promoters, TBP and SNAPc bind ...
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Transcriptional activation of several heterologous promoters by the E6 protein of human papillomavirus type 16.
... The observations that TATA box-mutated TK and HIV LTR promoters recovered full wild-type E6-induced transcriptional activity only when their respective upstream regulatory elements GC/CA[r] ...
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Cloning of minute virus of mice cDNAs and preliminary analysis of individual viral proteins expressed in murine cells.
... Cloned cDNAs which lacked the large 514/1990 intron which removes the P38 TATA box at approximately nt 1978 and retained the small intron or, alternatively, had the small intron excised [r] ...
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lecture 4
... publishing as Benjamin Cummings Distal control element Activators Enhancer Promoter Gene TATA box General transcription factors DNA-bending protein Group of Mediator proteins RNA Polymer[r] ...
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Development of PCR Assays with Nested Primers Specific for Differential Detection of Three Human Anelloviruses and Early Acquisition of Dual or Triple Infection during Infancy
... the TATA box, corresponding to nt 99 to 227 in the prototype TTV isolate (TA278), nt 34 to 170 in the pro- totype TTMDV isolate (MD1-073), and nt 178 to 303 in the prototype TTMV isolate (CBD231), was ...
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PRH represses transcription in hematopoietic cells by at least two independent mechanisms
... TK TATA box in ...from TATA box contain- ing promoters but is very inefficient at repressing transcription from a TATA-less ...TK TATA box under conditions that allowed ...
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The promoter and transcriptional unit of a novel herpes simplex virus 1 alpha gene are contained in, and encode a protein in frame with, the open reading frame of the alpha 22 gene.
... with the same kinetics as a 22 mRNA (i.e., in the presence of cycloheximide; data not shown). Therefore, primer extension analyses were done on cytoplasmic RNA prepared from both untreated and cycloheximide-treated cells ...
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Can terminators be used as insulators into yeast synthetic gene circuits?
... As shown above, the efficiency element of yeast termi- nators is able to recruit RNA polymerase II due to its resemblance to a TATA box. Once placed in front of a constitutive yeast promoter, the efficiency ...
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Validation of reference genes for expression analysis by quantitative real time PCR in Leptinotarsa decemlineata (Say)
... ARF4; TATA box binding protein, TBP1 and TBP2; ribosomal protein RP4 and RP18; translation elongation factor 1α EF1α) from the transcriptome and validated the stability of their ...
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