The strategy for sequencing
Sequencing strategy of SME: Examining the combined effects of organisational characteristics
... clearly influence their low rate of learning orientation (0, 32) accumulated by both quantitative questionnaire and qualitative interviews. The most interesting part in this case might come from the characteristic ...
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Sequetyping: Serotyping Streptococcus pneumoniae by a Single PCR Sequencing Strategy
... Sequencing Strategy Marcus H. Leung, a Kevin Bryson, b Kathrin Freystatter, a Bruno Pichon, c * Giles Edwards, d Bambos M. Charalambous, a and Stephen H. Gillespie a * Centre for Clinical Microbiology, ...
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A Strategy for Direct Mapping and Identification of Mutations by Whole-Genome Sequencing
... quick strategy provides a signifi- cant saving of time and labor as the time needed to map and identify a candidate causal mutation is trimmed down to the sequencing time (currently 7 days) and sequence ...
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A sequencing strategy for identifying variation throughout the prion gene of BSE affected cattle
... Findings: We improved a Sanger-based sequencing strategy for detecting bovine PRNP variation through all exons, introns, and part of the promoter (25.2 kb). Our current method can detect 389 known and other ...
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An integrated clinical program and crowdsourcing strategy for genomic sequencing and Mendelian disease gene discovery.
... testing strategy; for example, whether to use WES, WGS, or some intermediate approach such as chromosomal ...default sequencing strategy, primarily for cost considerations, but factors favoring WGS ...
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Application of single cell RNA sequencing in optimizing a combinatorial therapeutic strategy in metastatic renal cell carcinoma
... RNA sequencing (RNA-seq), we examine the intratumoral heterogeneity of a pair of primary renal cell carcinoma and its lung ...combinatorial strategy shows significant increase in the treatment efficacy over ...
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Whole exome sequencing is the preferred strategy to identify the genetic defect in patients with a probable or possible mitochondrial cause
... next-generation sequencing-based study, which included 113 pediatric patients with suspected mitochondrial disease, screening both the mtDNA and the exome, resulted in a diagnostic yield of 59% (Pronicka et ...
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Understanding the impact of antibiotic therapies on the respiratory tract resistome: a novel pooled-template metagenomic sequencing strategy
... metagenomic sequencing provides an alternative approach that allows the microbial composition of clinical samples to be described in detail, including the prevalence of resistance genes and virulence ...
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Metagenomic analysis and functional characterization of the biogas microbiome using high throughput shotgun sequencing and a novel binning strategy
... high-throughput sequencing and a novel bin- ning strategy, the identified genes were anchored to single genomes providing a clear understanding of their meta- bolic pathways and highlighting their ...
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A Pan HIV Strategy for Complete Genome Sequencing
... 16. Henn MR, Boutwell CL, Charlebois P, Lennon NJ, Power KA, Maca- lalad AR, Berlin AM, Malboeuf CM, Ryan EM, Gnerre S, Zody MC, Erlich RL, Green LM, Berical A, Wang Y, Casali M, Streeck H, Bloom AK, Dudek T, Tully D, ...
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Treatment sequencing strategy for hepatic epithelioid haemangioendothelioma
... There was no difference in 5-year survival between patients presenting with unilateral compared with bilateral hepatic disease (51.4% versus 80.7%, respectively; P = 0.1), localized comp[r] ...
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A cost effective and universal strategy for complete prokaryotic genomic sequencing proposed by computer simulation
... Jingwei Jiang 1 † , Jun Li 1 , Hoi Shan Kwan 2,3,4 , Chun Hang Au 2 , Patrick Tik Wan Law 4,5 , Lei Li 2 , Kai Man Kam 6 , Julia Mei Lun Ling 7 and Frederick C Leung 1* Abstract Background: Pyrosequencing techniques ...
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A Hybrid MPI-OpenMP Strategy to Speedup the Compression of Big Next-Generation Sequencing Datasets
... Sequential data compression solutions that once were sufficient to efficiently store and distribute this information are now falling behind. In this paper we introduce phyN- GSC, a hybrid MPI-OpenMP strategy to ...
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Original Article Analysis of mRNA profile in different strategy of bladder cancer carcinoma by deep sequencing
... 1 Key Laboratory of System Bio-medicine of Jiangxi Province, Jiujiang University, Jiujiang 332000, China; 2 Depart- ment of Urology, The First Affiliated Hospital of Nanchang University, Nanchang 330006, China; 3 School ...
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Efficient strategy for the molecular diagnosis of intractable early-onset epilepsy using targeted gene sequencing
... generation sequencing; NICU: Neonatal intensive care unit; OMIM: Online Mendelian Inheritance in Man; PolyPhen-2: Polymorphism Phenotyping v2; SIFT: Sorting Tolerant from Intolerant; SNV: Small nucleotide variant; ...
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Application of Bioaugmentation Strategy in Biodegradation of Di n octyl Phthalate (DOP) in Sequencing Batch Reactor (SBR)
... Bioaugmentation by inoculating DOP-degrading bacteria effectively shortened the start-up of SBRs and significantly enhanced DOP degradation in bioreactors ( p <0.05), 92.3% DO[r] ...
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Sequencing studies of pichinde arenavirus S RNA indicate a novel coding strategy, an ambisense viral S RNA.
... Analyses of the complete sequence of the 1.1 x 106-dalton, small (S) RNA of the arenavirus Pichinde and virus-induced cellular RNA species have revealed that the viral nucleoprotein, N,'[r] ...
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Standards for Sequencing Viral Genomes in the Era of High Throughput Sequencing
... HT sequencing reads, but this is not a requirement for the submission of a genome, nor is this option typically ...sourcing strategy to genome assembly, similar to the annotation strategies that have been ...
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Sequencing fiscal decentralization
... First, without a roadmap for the decentralization strategy, government and Parliament will “make it up as they go.” This can lead to pieces of the decentralization strategy that do not fit together, e.g., ...
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Sequencing fiscal decentralization
... the sequencing of decentralization policies must follow identification of the primary objectives of the ...best sequencing for a program driven by another primary ...decentralization strategy can be ...
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