Transcription Factor (TF)
Virus induced gene complementation reveals a transcription factor network in modulation of tomato fruit ripening
... forward-genetics tool in plant functional genomics. However the potential of virus technology to express genes to induce phenotypes or to complement mutants in order to understand the function of plant genes is not well ...
8
Temporal Hierarchy of Gene Expression Mediated by Transcription Factor Binding Affinity and Activation Dynamics
... for transcription factor (TF)-binding ...with TF- binding affinities, in contrast to the intuitive and oversimplified assumption that promoters with higher affinity for a TF tend to ...
10
OsSND2, a NAC family transcription factor, is involved in secondary cell wall biosynthesis through regulating MYBs expression in rice
... family transcription factor (TF), OsSND2 through yeast one-hybrid screening using the secondary wall NAC-binding element (SNBE) on the promoter region of OsMYB61 which is known transcription ...
14
DNA binding and dimerisation properties of the transcription factor COUP-TF II
... basal transcription factor in ...necessary transcription cofactor(s) being limiting in this cell type (Blanco et al ...1995). Transcription factors m ay also act to displace negative cofactors ...
263
Multiple regulatory roles of AP2/ERF transcription factor in angiosperm
... tomato Transcription Factor Pti4 Regulates Defense- Related Gene Expression for Pseudomonas syringae and Erysiphe orontii by combined to GCC Box and Non-GCC Box cis Elements (Chakravarthy et ...
8
The Transcription Factor FoxK Participates with Nup98 To Regulate Antiviral Gene Expression
... additional transcription factor binding sites are enriched within 100 bp of Foxk1 binding sites, including AP1 sites, suggesting that Foxk1 may cooperate with other transcription factors in the ...
10
A Horizontally Acquired Transcription Factor Coordinates Salmonella Adaptations to Host Microenvironments
... master transcription factor mutant, the ssrB mu- tant, 1,503 proteins were detected and allowed quantitative com- parison with the wild type (wt), of which 65 decreased and 26 increased significantly in the ...
11
A Novel Biomedical Knowledge Base for Genomic and Proteomic Analysis using Graph Clustering and Collaborative Filtering
... miRNA, Transcription Factor (TF) and gene), Collaborative filtering and depth first search (for gene ontology - Molecular Function (MF), Biological Process (BP), and Cellular Component (CC)) ...
11
Functional CRISPR screen identifies AP1 associated enhancer regulating FOXF1 to modulate oncogene induced senescence
... enhancer-binding transcription factor (TF), whose function in transcriptional regulation is re- quired for its tumor suppressive activity, we previously performed a CRISPR-based functional genomic ...
13
Whole adult organism transcriptional profiling of acute metal exposures in male Zebrafish
... and transcription factor (TF) enrichment algorithms revealed a number of key biological processes perturbed by metal poisonings and the master transcriptional regulators mediating gene expression ...
15
Highly efficient intracellular transduction in three dimensional gradients for programming cell fate
... delivered transcription factors can by-pass growth factor complexity but there is still a requirement to deliver such activity ...a transcription factor (TF, myogenic master regulator ...
59
Chromatin landscapes and genetic risk in systemic lupus
... Transcription factor binding sites at enhancer regions in LD blocks in CD4 + cells, CD19 + cells, and neutrophils We next sought to further test the likely functional significance of H3K4me1, H3K4me3, and ...
12
Lineage and stage specific expressed CYCD7;1 coordinates the single symmetric division that creates stomatal guard cells
... transitions, transcription factor (TF) function and expression window of the master bHLH transcription factors SPCH (green), MUTE (blue), and FAMA ( purple) and CYCD7;1 (orange) are ...E2F-DP ...
10
<p>KLF6 Induces Apoptosis in Human Lens Epithelial Cells Through the ATF4-ATF3-CHOP Axis</p>
... activating transcription factor 6 (ATF6), the foremost of which is the PERK-mediated PERK-eIF2 α -ATF4 ...important factor that switches the survival signal to a pro-death ...
15
Viral delivery of antioxidant genes as a therapeutic strategy in experimental models of amyotrophic lateral sclerosis.
... mimic and offers neuroprotection by inducing transcription of ARE genes.12 Nuclear factor erythroid 2–related factor 2 NRF2 is a basic leucine zipper transcription factor and is the prin[r] ...
12
Modeling the Transcriptional Regulatory Network That Controls the Early Hypoxic Response in Candida albicans
... transcriptional response to hypoxia. We also profiled the hypoxic response in ⌬tye7 mutants as well as in cells missing the Ahr1 transcription factor, which has been shown previously to bind to and to ...
16
Ch. 11 Cell Communication Notes.ppt
... Figure 11.15 Growth factor Receptor Reception Transduction CYTOPLASM Response Inactive transcription factor Active transcription factor DNA NUCLEUS mRNA Gene Phosphorylation cascade P.. [r] ...
92
Curcumin targets the TFEB-lysosome pathway for induction of autophagy
... activates transcription factor EB (TFEB), a key nuclear transcription factor in control of autophagy and lysosome biogenesis and function, based on the following observations: (i) Curcumin ...
13
Genetic analysis of the adenovirus E4 6/7 trans activator: interaction with E2F and induction of a stable DNA-protein complex are critical for activity.
... DISCUSSION The cellular E2F transcription factor is a critical component of the functional transcription complex that drives adenovirus E2 transcription and is a target for trans activat[r] ...
10
Evidence for a second ankylosing spondylitis associated RUNX3 regulatory polymorphism
... dent AS-associated SNPs in such close proximity possibly operating in different cell types highlights a role for Figure 5 rs4265380 interacts with RP4-799D16.1 (A) Hi-C plot showing the interaction of the RUNX3 bait with ...
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