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[PDF] Top 20 Comparative analysis of full genomic sequences among different genotypes of dengue virus type 3

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Comparative analysis of full genomic sequences among different genotypes of dengue virus type 3

Comparative analysis of full genomic sequences among different genotypes of dengue virus type 3

... of different genotypes of DENV-3 indicates that they originated in Southeast Asia; these gen- otypes demonstrated higher epidemic potential with regards to severe DHF epidemics in Sri Lanka, Central ... See full document

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Introduction and evolution of dengue virus type 2 in Pakistan: a phylogeographic analysis

Introduction and evolution of dengue virus type 2 in Pakistan: a phylogeographic analysis

... generated 3 full length and 24 envelope DENV-2 sequences in this ...genome sequences for complete genome phylogenetic analysis and 137 envelope se- quences for phylogenetic and ... See full document

11

Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome

Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome

... or 3 ⬘ UAR abolish viral replication, while reconstitution of 5 ⬘ -3 ⬘ UAR complementarity restores the viral ...the dengue virus genome showing the predicted secondary structure of the RNA ... See full document

13

Identification of Specific Nucleotide Sequences within the Conserved 3′-SL in the Dengue Type 2 Virus Genome Required for Replication

Identification of Specific Nucleotide Sequences within the Conserved 3′-SL in the Dengue Type 2 Virus Genome Required for Replication

... and 3 * noncoding regions (NCR) of approximately 100 and 400 to 600 nucleotides (nt), ...The 3 * NCR contains adjacent, thermody- namically stable, conserved short and long stem-and-loop structures (the ... See full document

13

Genetic diversity of the E Protein of Dengue Type 3 Virus

Genetic diversity of the E Protein of Dengue Type 3 Virus

... of dengue outbreaks [2]. Dengue is an enveloped virus with a single-stranded, pos- itive-sense RNA genome of about 11 kb containing a sin- gle open reading frame, flanked by untranslated regions (5' ... See full document

13

Identification, Molecular Cloning, and Analysis of Full Length Hepatitis C Virus Transmitted/Founder Genotypes 1, 3, and 4

Identification, Molecular Cloning, and Analysis of Full Length Hepatitis C Virus Transmitted/Founder Genotypes 1, 3, and 4

... and analysis of T/F molecular ...the sequences of seven T/F genomes corresponding to genotypes 1a, 1b, 3a, and 4a from six subjects could be inferred ...These sequences were chemi- cally ... See full document

15

Analysis of Murine CD8+ T-Cell Clones Specific for the Dengue Virus NS3 Protein: Flavivirus Cross-Reactivity  and Influence of Infecting Serotype

Analysis of Murine CD8+ T-Cell Clones Specific for the Dengue Virus NS3 Protein: Flavivirus Cross-Reactivity and Influence of Infecting Serotype

... the dengue type 4 virus NS3 protein were cross-reactive with dengue type 2 or type 4 virus, while broadly serotype-cross-reactive CTL were a minority ...In dengue ... See full document

6

Genomic Diversity of Epstein-Barr Virus Genomes Isolated from Primary Nasopharyngeal Carcinoma Biopsy Samples

Genomic Diversity of Epstein-Barr Virus Genomes Isolated from Primary Nasopharyngeal Carcinoma Biopsy Samples

... on sequences of whole-ge- nome BLLF1, BPLF1, and BZLF1 genes showed that HKNPC6 and -7 were segregated in a different branch from that of the other NPC-EBV ...HKNPC1 sequences revealed a region from ... See full document

12

Simultaneous circulation of genotypes I and III of dengue virus 3 in Colombia

Simultaneous circulation of genotypes I and III of dengue virus 3 in Colombia

... a different region of the E gene, without recent closely-related sequences available on GenBank to ...related sequences corre- sponding to Asian strains were isolated in 1973 in Japan as an imported ... See full document

10

Sequence diversity of dengue virus type 2 in brain and thymus of infected interferon receptor ko mice: implications for dengue virulence

Sequence diversity of dengue virus type 2 in brain and thymus of infected interferon receptor ko mice: implications for dengue virulence

... parent virus, the majority of these changes represented synonymous (silent) changes in the structural and non-structural proteins encoded by the ...comparing among the original DV2P04/08, viruses recovered ... See full document

8

Strategically examining the full genome of dengue virus type 3 in clinical isolates reveals its mutation spectra

Strategically examining the full genome of dengue virus type 3 in clinical isolates reveals its mutation spectra

... consensus sequences after excluding the sequences of amplifying primers were aligned using GCG package (Genetic Com- puter Group, ...For full-length genomic sequences we paid special ... See full document

10

Molecular characterization of Hepatitis C virus 3a in Peshawar

Molecular characterization of Hepatitis C virus 3a in Peshawar

... infection among the actively infected HCV samples, RT PCR followed by Type specific nested PCR based genotyping assay was carried ...Genotyping analysis revealed that out of the 422 ...genetic ... See full document

6

Co circulation of two genotypes of dengue virus serotype 3 in Guangzhou, China, 2009

Co circulation of two genotypes of dengue virus serotype 3 in Guangzhou, China, 2009

... Whether dengue is endemic in Guangdong remains disputable. Most dengue epidemics in Guangdong were initiated by the introduction of virus from imported cases [13,18,19,27,30], however, in this study ... See full document

8

Pathogen-derived resistance to dengue type 2 virus in mosquito cells by expression of the premembrane coding region of the viral genome.

Pathogen-derived resistance to dengue type 2 virus in mosquito cells by expression of the premembrane coding region of the viral genome.

... DEN-2 virus could be estab- lished in C6/36 cells initially infected with D2prMs virus and expressing DEN-2 prM ...D2prM.np virus that expressed an untranslatable prM sense RNA. PDR to DEN-2 ... See full document

6

Molecular Epidemiology of Hepatitis C Virus Genotype 4 Isolates in Egypt and Analysis of the Variability of Envelope Proteins E1 and E2 in Patients with Chronic Hepatitis

Molecular Epidemiology of Hepatitis C Virus Genotype 4 Isolates in Egypt and Analysis of the Variability of Envelope Proteins E1 and E2 in Patients with Chronic Hepatitis

... short peptides and translocated into the endoplasmic reticu- lum or loading onto HLA class I molecules (1, 39, 41). The HLA-peptide binding depends on amino acids known as an- chor residues (41). The complex of a peptide ... See full document

8

Comparative Genomic Analysis of Globally Dominant ST131 Clone with Other Epidemiologically Successful Extraintestinal Pathogenic Escherichia coli (ExPEC) Lineages

Comparative Genomic Analysis of Globally Dominant ST131 Clone with Other Epidemiologically Successful Extraintestinal Pathogenic Escherichia coli (ExPEC) Lineages

... on comparative genomic analysis of ST131 strains has shown majority of the MGEs to be present in ST131 clade C ...BRIG analysis of MGEs (previously defined in EC958 [44]) revealed that most of ... See full document

15

Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus Furovirus

Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus Furovirus

... nucleotide sequences of both RNAs of oat golden stripe virus (OGSV) and a wheat-infecting furovirus isolate from France, previously thought to be soil-borne wheat mosaic virus (SBWMV), have been ... See full document

10

Structural characterization of copia-type retrotransposons leads to insights into the marker development in a biofuel crop, Jatropha curcasL.

Structural characterization of copia-type retrotransposons leads to insights into the marker development in a biofuel crop, Jatropha curcasL.

... movement toward the transitioning from fossil to renew- able fuels such as biofuels. Although biofuels offer a di- verse range of promising alternatives, a spurt in world population growth and concerns over food security ... See full document

13

Characterization and epitope mapping of Dengue virus type 1 specific monoclonal antibodies

Characterization and epitope mapping of Dengue virus type 1 specific monoclonal antibodies

... To develop neutralizing monoclonal antibodies (mAbs), BALB/c mice were immunized with UV-inactivated DV1 viral particles and then boosted with recombinant DV1 E395 protein. The mice were bled and the serum sam- ples were ... See full document

11

Reevaluation of the Taxonomic Status of Recently Described Species of Enterococcus: Evidence that E  thailandicus Is a Senior Subjective Synonym of “E  sanguinicola” and Confirmation of E  caccae as a Species Distinct from E  silesiacus

Reevaluation of the Taxonomic Status of Recently Described Species of Enterococcus: Evidence that E thailandicus Is a Senior Subjective Synonym of “E sanguinicola” and Confirmation of E caccae as a Species Distinct from E silesiacus

... formal type strain ...thailandicus type strain, so the API Rapid ID32 Strep system was used to look for additional biochemical mark- ...the 3 strains was classified as “doubtful profile” with the ... See full document

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