[PDF] Top 20 Evaluation of the Epidemiological Relevance of Variable Number Tandem Repeat Genotyping of Mycobacterium bovis and Comparison of the Method with IS6110 Restriction Fragment Length Polymorphism Analysis and Spoligotyping
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Evaluation of the Epidemiological Relevance of Variable Number Tandem Repeat Genotyping of Mycobacterium bovis and Comparison of the Method with IS6110 Restriction Fragment Length Polymorphism Analysis and Spoligotyping
... M. bovis. In contrast to Mycobacterium tuberculosis, restriction fragment length polymorphism typing using IS6110 (IS6110 RFLP) provides only limited discrimination ... See full document
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Comparative Study of IS6110 Restriction Fragment Length Polymorphism and Variable Number Tandem Repeat Typing of Mycobacterium tuberculosis Isolates in the Netherlands, Based on a 5 Year Nationwide Survey
... from IS6110 and polymorphic GC-rich repetitive sequence (PGRS) restriction fragment length polymorphism (RFLP) to 24-locus variable-number tandem-repeat ... See full document
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Use of Variable Number Tandem Repeat Typing To Differentiate Mycobacterium tuberculosis Beijing Family Isolates from Hong Kong and Comparison with IS6110 Restriction Fragment Length Polymorphism Typing and Spoligotyping
... on variable numbers of tandem repeats (VNTRs) is a promising PCR-based molecular typing method for ...multilocus method, the isolates can be typed for practical epidemiological ... See full document
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New Variable Number Tandem Repeat Markers for Typing Mycobacterium avium subsp paratuberculosis and M avium Strains: Comparison with IS900 and IS1245 Restriction Fragment Length Polymorphism Typing
... distant Mycobacterium bovis BCG strain ...VNTR polymorphism among BCG sister strains cultivated separately for more than 30 years ...a polymorphism involving two other IS900 RFLP single-band ... See full document
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Comparison of a Variable Number Tandem Repeat (VNTR) Method for Typing Mycobacterium avium with Mycobacterial Interspersed Repetitive Unit VNTR and IS1245 Restriction Fragment Length Polymorphism Typing
... standard method for the typing of ...this method is limited because of reduced resolution when ...stantial number of IS1245 sequences, as is the case with the Mycobacterium tuberculosis ... See full document
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Study of Restriction Fragment Length Polymorphism Analysis and Spoligotyping for Epidemiological Investigation ofMycobacterium bovis Infection
... Restriction fragment length polymorphism (RFLP) analysis with probes derived from the insertion element IS6110, the direct repeat sequence, and the polymorphic GC-rich ... See full document
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Development of Variable Number Tandem Repeat Typing of Mycobacterium bovis: Comparison of Results with Those Obtained by Using Existing Exact Tandem Repeats and Spoligotyping
... the Mycobacterium tuberculosis complex (MTBC) in molecular epidemiological studies, mainly through identifying restriction fragment length poly- morphisms ...and analysis ... See full document
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Genetic Diversity of Mycobacterium africanum Clinical Isolates Based on IS6110 Restriction Fragment Length Polymorphism Analysis, Spoligotyping, and Variable Number of Tandem DNA Repeats
... as Mycobacterium africanum were characterized using both phenotypic and genotyping ...on IS6110-restriction fragment length polymorphism (IS6110- RFLP) ... See full document
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Comparison of a Semiautomated Commercial Repetitive Sequence Based PCR Method with Spoligotyping, 24 Locus Mycobacterial Interspersed Repetitive Unit–Variable Number Tandem Repeat Typing, and Restriction Fragment Length Polymorphism Based Analysis of IS6110 for Mycobacterium tuberculosis Typing
... by spoligotyping, 24-locus MIRU-VNTR, and IS6110-RFLP, including three East African-Indian (EAI) strains (one EAI3-IND and two EAI2-PHL) and six Beijing, five Haarlem (three H1 and two H3), six Latin ... See full document
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Discordance between Mycobacterial Interspersed Repetitive Unit Variable Number Tandem Repeat Typing and IS6110 Restriction Fragment Length Polymorphism Genotyping for Analysis of Mycobacterium tuberculosis Beijing Strains in a Setting of High Incidence of Tuberculosis
... IS6110 restriction fragment length polymorphism (RFLP) genotyping is the most widely used genotyping method to study the epidemiology of Mycobacterium ...the ... See full document
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Comparison of Variable Number Tandem Repeat and IS6110 Restriction Fragment Length Polymorphism Analyses for Discrimination of High and Low Copy Number IS6110 Mycobacterium tuberculosis Isolates
... The method which is used most commonly for investigating the epidemiology of infection by ...is IS6110 re- striction fragment length polymorphism (IS6110-RFLP) anal- ysis ...This ... See full document
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Evaluation of Mycobacterial Interspersed Repetitive Unit Variable Number Tandem Repeat Analysis and Spoligotyping for Genotyping of Mycobacterium bovis Isolates and a Comparison with Restriction Fragment Length Polymorphism Typing
... typing method that reveals the presence or absence of unique spacer sequences located between the direct-repeat sequences of the DR region ...However, spoligotyping does not differentiate M. ... See full document
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Mycobacterial Interspersed Repetitive Unit Typing of Mycobacterium tuberculosis Compared to IS6110 Based Restriction Fragment Length Polymorphism Analysis for Investigation of Apparently Clustered Cases of Tuberculosis
... of polymorphism in the number of copies of tandem repeat sequences is an invaluable tool for the genotyping of higher ...limited number of these structures (five in total) were ... See full document
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Comparison of Variable-Number Tandem-Repeat Markers typing and IS1245 Restriction Fragment Length Polymorphism fingerprinting of Mycobacterium avium subsp. hominissuis from human and porcine origins
... the epidemiological links between isolates ...demanding method, that requires large amounts of purified bacterial DNA and an analysis of complex banding ... See full document
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Genetic Diversity of Mycobacterium tuberculosis Isolates from a Tertiary Care Tuberculosis Hospital in South Korea
... by spoligotyping, IS6110 restriction fragment length polymorphism (RFLP), and 24- locus-based mycobacterial interspersed repetitive unit-variable number ... See full document
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Genetic Heterogeneity in Mycobacterium tuberculosisIsolates Reflected in IS6110 Restriction Fragment Length Polymorphism Patterns as Low Intensity Bands
... 1,277 IS6110 RFLP patterns no mul- tiply banded background patterns, indicative of tuberculosis infections with more than one strain, were ...of IS6110 RFLP, in which almost all initial and follow-up ... See full document
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Improved Multiple Locus Variable Number Tandem Repeat Assay for Staphylococcus aureus Genotyping, Providing a Highly Informative Technique Together with Strong Phylogenetic Value
... a method called multilocus variable-number tandem- repeat fingerprinting (MLVF) to reflect the fact that the data are not interpreted in terms of repeat copy number at ... See full document
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Mycobacterium bovis population structure in cattle and local badgers: co-localisation and variation by farm type
... M. bovis genotypes between badgers and ...M. bovis epidemic is less likely to be observed in herds associated with a high animal ...M. bovis genotypes, resulting in the repeated emergence of M. ... See full document
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Stability of IS6110 Restriction Fragment Length Polymorphism Patterns of Mycobacterium tuberculosisStrains in Actual Chains of Transmission
... The analysis of clusters that are initially identified by IS6110 fingerprinting might lead to the exclusion of isolates with changed IS6110 RFLP patterns, which in turn may result in falsely low ... See full document
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Genotypic characterization of five subspecies of Mycobacterium kansasii
... including restriction fragment length polymorphism (RFLP) analysis with the major polymorphic tandem repeat (MPTR) probe and the IS1652 probe, pulsed-field gel electro- ... See full document
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