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[PDF] Top 20 Genes controlling root development in rice

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Genes controlling root development in rice

Genes controlling root development in rice

... post-embryonic root initiation in response to auxin The crown root less 4 (crl4) mutant is impaired in OsG- NOM1, which encodes a membrane-associated guanine- nucleotide exchange factor for the ... See full document

11

The roots of future rice harvests

The roots of future rice harvests

... of rice root growth, in terms of cell differentiation, anatomy, ion fluxes, and hydraulic conductance requires phenotyping systems that are operational at a finer scale in addition to those characterizing ... See full document

9

Histological characterization of the lateral root primordium development in rice

Histological characterization of the lateral root primordium development in rice

... in rice. A model was proposed in rice for LRP ...several genes, especially OsPINs, during the rice LRP development for the first ...in root (Blilou et ...lateral root cap ... See full document

6

Transcriptome analysis reveals that barnyard grass exudates increase the allelopathic potential of allelopathic and non-allelopathic rice (Oryza sativa) accessions

Transcriptome analysis reveals that barnyard grass exudates increase the allelopathic potential of allelopathic and non-allelopathic rice (Oryza sativa) accessions

... certain rice (Oryza sativa ...of rice allelopathy for controlling paddy weeds, thus reducing herbicide usage in rice ...study, rice allelopathy has yet to be widely applied in ...that ... See full document

14

Type B response regulators of rice play key roles in growth, development and cytokinin signaling

Type B response regulators of rice play key roles in growth, development and cytokinin signaling

... families. Rice is an ideal species to elucidate the role of cytokinin because of its small genome size, the availability of reference genome sequences and its ease of transformation (Devos and Gale, ...individual ... See full document

11

Genome-wide analysis of root hair-preferential genes in rice

Genome-wide analysis of root hair-preferential genes in rice

... specific genes was found among vascular plants (Huang et ...our rice seedlings on an MS medium to obtain root hairs, whereas the Arabidopsis samples were grown on a cellophane disc (Becker et ...some ... See full document

12

Molecular Genetics of Rice Root Development

Molecular Genetics of Rice Root Development

... in rice correlates well with the function proposed for AtSCR in ...in rice and ...putative rice QC in ...in rice to that described for ...In rice, there are two putative orthologs to ... See full document

20

Development of a microarray for two rice subspecies: characterization and validation of gene expression in rice tissues

Development of a microarray for two rice subspecies: characterization and validation of gene expression in rice tissues

... expressed genes was generated; among 3,138 up-regulated genes (Additional file 1), 438 were shoot-specific genes (Additional file 2), and among 3,845 down-regulated genes (Additional file 3), ... See full document

9

Rice Root Genetic Architecture: Meta-analysis from a Drought QTL Database

Rice Root Genetic Architecture: Meta-analysis from a Drought QTL Database

... time genes, precision was considerably improved since the confidence intervals of the two meta-QTLs co- localizing with the genes were smaller than that of each individual QTL mapped in the individual ... See full document

14

Phenotypic Analysis of Gene Expression in Proposed Populus Root Development and Growth Genes.

Phenotypic Analysis of Gene Expression in Proposed Populus Root Development and Growth Genes.

... enhanced root systems that would have the capacity to store more carbon belowground, or to have the ability to grow more successfully on unfavorable ...the genes controlling root ... See full document

96

Molecular Mechanisms of Root Development in Rice

Molecular Mechanisms of Root Development in Rice

... crown root devel- opment, and the growth of functional genomics has meant that growing numbers of auxin-related genes have been found to be involved in this developmental ...crown root initiation ... See full document

10

Genes controlling pancreas ontogeny

Genes controlling pancreas ontogeny

... The repression of Shh in the dorsal pancreatic endoderm is mediated by the adjacent notochord (Kim et al., 1997). This inhibition is permissive for the ex- pression of Pdx1. Hebrok and others determined that TGF β ligand ... See full document

14

Drought Stress Results in a Compartment Specific Restructuring of the Rice Root Associated Microbiomes

Drought Stress Results in a Compartment Specific Restructuring of the Rice Root Associated Microbiomes

... Coherence of drought response across taxonomic ranks. Comparison of the results obtained at the phylum- and OTU-level analyses (Fig. 2 and 3) shows that some of the major taxonomic trends were consistent in both cases: ... See full document

15

Molecular and Evolutionary Analysis of the Hd6 Photoperiod Sensitivity Gene Within Genus Oryza

Molecular and Evolutionary Analysis of the Hd6 Photoperiod Sensitivity Gene Within Genus Oryza

... four rice varieties and 14 wild rice accessions were used as primary materials for sequencing the whole genomic regions of the Hd6 gene (Table ...the Rice Genome Research Program ... See full document

11

Production of Hydrolytic Enzymes in Rice (Oryza sativa L.) Roots Inoculated with N2-Fixing Bacteria

Production of Hydrolytic Enzymes in Rice (Oryza sativa L.) Roots Inoculated with N2-Fixing Bacteria

... The EG and EPMG activity of rice roots were measured as described by Adriano- Anaya et al. (2006) with some modifications. Roots were pulverized in a chilled mortar. The resulting powder was homogenized in 100 mM ... See full document

15

Genome-wide association analysis of panicle exsertion and uppermost internode in rice (Oryza sativa L.)

Genome-wide association analysis of panicle exsertion and uppermost internode in rice (Oryza sativa L.)

... K rice SNP marker set was used for GWAS as de- scribed by McCouch et ...Candidate genes were predicted according to the Rice Genome Annotation Project MSU7 database ... See full document

13

Overexpression of OsMAPK2 Enhances Low Phosphate Tolerance in Rice and Arabidopsis thaliana

Overexpression of OsMAPK2 Enhances Low Phosphate Tolerance in Rice and Arabidopsis thaliana

... transgenic rice plants was used for analyzing the expression of OsMAPK2; (c) qRT-PCR analysis of the ex- pression levels of two transgenic lines with overexpression of ... See full document

11

Identification of Quantitative Trait Loci Controlling Floral Morphology of Rice Using a Backcross Population between Common Cultivated Rice, Oryza sativa and Asian Wild Rice, O  rufipogon

Identification of Quantitative Trait Loci Controlling Floral Morphology of Rice Using a Backcross Population between Common Cultivated Rice, Oryza sativa and Asian Wild Rice, O rufipogon

... In rice, the filament of male stamen starts to elongate rapidly, immediately after the opening of ...wild rice species exposes the anther outside the spikelet, hereby increasing the possibility of ... See full document

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EVIDENCE FOR THE EXISTENCE OF GENES CONTROLLING SHAPE

EVIDENCE FOR THE EXISTENCE OF GENES CONTROLLING SHAPE

... These are as follows: (1) the fact that a simple, clearly segregating fruit-shape difference is inherited independent- ly of fruit size; (2) the fact that there is rarely or never [r] ... See full document

10

WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks

WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks

... of genes at the early (early globular embryo) and late developmental stages (seed maturation, dormancy and desiccation tolerance (Itoh et ...of genes that are import- ant not only for embryo ... See full document

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