[PDF] Top 20 Genome wide identification of enhancer elements
Has 10000 "Genome wide identification of enhancer elements" found on our website. Below are the top 20 most common "Genome wide identification of enhancer elements".
Genome wide identification of enhancer elements
... Fig. 3. Authentication of cis-regulatory elements identified by GRIP-seq at the onecut locus. GRIP-seq signal at the onecut locus coincides with an experimentally- corroborated cis-regulatory region, active at ... See full document
11
Enhancer identification and activity evaluation in the red flour beetle, Tribolium castaneum
... To obtain chromatin profiles from diverse tissues and stages of Tribolium, we performed FAIRE-seq with the following six samples: three stages of embryos (0-24, 24-48 and 48-72 h), the second (T2) and third (T3) thoracic ... See full document
13
Genome-wide Identification and Characterization of Enhancers Across 10 Human Tissues
... the enhancer in these ten tissues (Supplementary ...that enhancer RNAs can be classified into unidirectional (1D-eRNAs) and bidirectional eRNAs (2D-eRNAs) according to their transcriptional direction ...the ... See full document
12
Genome-wide analysis of transposable elements and tandem repeats in the compact placozoan genome
... gypsy-like elements (Ta1-11) shared a recognizable reverse transcriptase (RT) region, thus enabling investi- gation of their phylogenetic ...gypsy-like elements revealed a new clade (named Tag), which was ... See full document
9
Genome wide identification of phospho regulators of Wnt signaling in Drosophila
... The enhancer of ptc, unlike that of other Hh pathway targets, responds in a cooperative manner to both the levels and active state of Ci; thus, a change in the levels of Ci that modulates the amplitude of Hh ... See full document
14
Genome wide mapping of promoter anchored interactions with close to single enhancer resolution
... DNA elements, essential for the regulation of transcription at nearby genes ...the genome-wide mapping of enhancers, ...each enhancer. Since enhancer regulation is mediated via ... See full document
13
Genome-wide identification and comparative analysis of coiled-coil proteins
... First, coiled-coil sequences were masked by replacing amino acids predicted to be inside a coiled-coil region with the generic letter X. The masked sequence set was then compared in an all-against-all approach using the ... See full document
5
Genome wide identification of Tribolium dorsoventral patterning genes
... Fig. 2. Tc-twist is required for ventral furrow formation and mesoderm specification. (A-D) Stills from movies of an nGFP line (see Movies 1-3). (A,B) Embryos at horseshoe stage of amniotic fold formation (Benton et al., ... See full document
12
Genome-wide Search for Elements that may Affect Translation in Arabidopsis thaliana.
... Arabidopsis genome, but only few uORFs are experimentally characterized and in most cases it is unknown what biological function they have and if they are translated (Imai, Hanzawa et ...Experimental ... See full document
120
Identification of Long-Range Regulatory Elements in the Human Genome
... regulatory elements using the molecular biology technique known as chromatin immunoprecipitation (ChIP) with antibodies that directly detect specific covalent modifications of histone ...active enhancer ... See full document
141
Drosophila CP190- and dCTCF-mediated enhancer blocking is augmented by SUMOylation
... ary elements of the bithorax complex (BX-C) and thereby contributes to the correct expression pattern of the homeotic genes in this gene cluster [10, ...mediates enhancer blocking at this ...S2-cells. ... See full document
14
Genome wide Annotation, Identification, and Global Transcriptomic Analysis of Regulatory or Small RNA Gene Expression in Staphylococcus aureus
... from genome annotation files, and as a consequence, their existence is often overlooked, particularly in global transcriptomic ...include genome-wide annotation of sRNAs in ...in genome anno- ... See full document
13
Genome wide identification of regulatory elements in Sertoli cells
... the genome for potential disease-causing mutations, including exome sequencing and copy number variation arrays (White et ...a genome-wide scale remains difficult, and classification of non-coding ... See full document
11
Genome Wide Identification of Acinetobacter baumannii Genes Necessary for Persistence in the Lung
... a wide range of diseases in hospital settings, including pneumonia, bloodstream infections, soft tissue infections, and meningitis, ...resistance elements and ability to resist des- iccation and common ... See full document
8
Genome-wide identification and expression analysis of DNA demethylase family in cotton
... DNA methylation is an epigenetic modification widely found in bacteria, plants and animals (Chen et al. 2015; Manning et al. 2006; Zhong et al. 2013). It involves gene silencing, transposon suppression, genomic ... See full document
9
Genome-Wide Analysis of a Radiation-Induced Lesion Mimic Mutant in Rice
... JA001 is a variety of LMM derived from rice IR64 using 60COγ–radiation. The mutation begins to appear as yellow–brown lesion mimic spots on rice-plant leaves after the four-leaf stage. Although the ... See full document
11
Genome-wide association analysis of body conformation traits in Mexican Holstein cattle using a mix of sampled and imputed SNP genotypes.
... a genome-wide association analysis for a set of sampled and imputed SNPs with 16 conformation traits in a population of Mexican Holstein cows, revealed eight significant SNPs: one associated with the Body ... See full document
9
CRUP: a comprehensive framework to predict condition specific regulatory units
... active enhancer regions (light blue) and the correlated gene ...differential enhancer in this subset, the nearest gene was also taken as an alternative target ... See full document
23
Genome-wide analysis of salinity-stress induced DNA methylation alterations in cotton (Gossypium hirsutum L.) using the Me-DIP sequencing technology.
... the elements upstream2k, intron, downstream2k, and 3'-UTR were hypomethylated compared to the control after the NaCl stress treatment, whereas the genes located in 5'-UTR and CDS showed a hypermethylated ...gene ... See full document
16
Plant Long ncRNAs: A New Frontier for Gene Regulatory Control
... whole genome tiling arrays or trans- criptome sequencing have revealed that 70% - 90% of the mammalian genome is transcriptionally active, but only 1% - 2% code for proteins, suggesting that a large ... See full document
8
Related subjects