[PDF] Top 20 Identification of Acinetobacter genomic species by amplified ribosomal DNA restriction analysis
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Identification of Acinetobacter genomic species by amplified ribosomal DNA restriction analysis
... of restriction enzyme AluI (AGCT), CfoI (GCGC), HaeIII (GGCC), HinfI (GANTC), MboI (GATC), MspI (CCGG), NciI [CC(GC)GG], RsaI (GTAC), ScrFI (CCNGG), or TaqI (TCGA) and 3 to 10 m l of PCR ...the restriction ... See full document
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Comparison of Amplified Ribosomal DNA Restriction Analysis, Random Amplified Polymorphic DNA Analysis, and Amplified Fragment Length Polymorphism Fingerprinting for Identification ofAcinetobacter Genomic Species and Typing ofAcinetobacter baumannii
... of Acinetobacter species, including type strains of the 18 genomic species and 13 clinical isolates, were compared by amplified ribosomal DNA restriction ... See full document
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Identification of Major Streptococcal Species by rrn Amplified Ribosomal DNA Restriction Analysis
... three restriction pat- terns were first compared to their respective data base but, in an effort to allow a definitive identification, the three data bases were combined using the average- linkage ... See full document
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Distribution of Acinetobacter species on human skin: comparison of phenotypic and genotypic identification methods
... 19 genomic species are recognized as constituting the genus ...web. Identification of Acinetobacter isolates was achieved by using phenotypic properties and was compared to ... See full document
7
Typing of Acinetobacter Baumannii Strains isolated from Hospital Patients by Amplified Ribosomal DNA Restriction Analysis (ARDRA)
... with identification of pathogens to their species; most clinical microbiology laboratories do not routinely identify organisms to the substrain level (Bergogne-Berezin and Towner, ...same species are ... See full document
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Species Identification and Strain Differentiation of Dermatophyte Fungi by Analysis of Ribosomal DNA Intergenic Spacer Regions
... the ribosomal-DNA (rDNA) repeat were used for molecular strain differentiation of the dermatophyte fungus Trichophyton ...rubrum genomic DNAs with a probe amplified from the small-subunit ... See full document
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Development of Amplified 16S Ribosomal DNA Restriction Analysis for Identification of Actinomyces Species and Comparison with Pyrolysis Mass Spectrometry and Conventional Biochemical Tests
... PMS. By PMS, strains VH20, VH21, and VH28 were con- taminated and thus were excluded from analysis. The remain- ing strains formed four superclusters (superclusters A, B, C, and E) plus cluster with a single ... See full document
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Species Level Identification of Isolates of the Acinetobacter calcoaceticus Acinetobacter baumannii Complex by Sequence Analysis of the 16S 23S rRNA Gene Spacer Region
... The species Acinetobacter calcoaceticus, A. baumannii, genomic species 3, and genomic species 13TU included in the Acinetobacter calcoaceticus-Acinetobacter ... See full document
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Bacterial Diversity in Cases of Lung Infection in Cystic Fibrosis Patients: 16S Ribosomal DNA (rDNA) Length Heterogeneity PCR and 16S rDNA Terminal Restriction Fragment Length Polymorphism Profiling
... bacterial species have been cultured from CF specimens and so are associated with lung ...extracting DNA directly from 14 bronchoscopy or sputum ...16S ribosomal DNA (rRNA) gene PCR products ... See full document
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Identification of Nocardia Species by Restriction Endonuclease Analysis of an Amplified Portion of the 16S rRNA Gene
... Molecular analysis. (i) DNA extraction. Organisms were grown on either Middlebrook 7H11 agar plates, Lowenstein Jensen agar slants, or Sabouraud dextrose agar slants (all from Remel). A loopful of growth ... See full document
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Evaluation of amplified rDNA restriction analysis (ARDRA) for the identification of Mycoplasma species
... correct identification of mycoplasmas, mostly per- formed after a fastidious initial isolation, may be achieved by various ...blot analysis [6]. These techniques are being replaced by faster ... See full document
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Identification of Dermatophyte Species by 28S Ribosomal DNA Sequencing with a Commercial Kit
... The occurrence of a species complex within T. mentagro- phytes has been previously suggested by PCR fingerprinting (2), amplified fragment length polymorphism analysis, and rDNA sequencing (3–5). We ... See full document
5
Identification of Clinical Isolates ofActinomyces Species by Amplified 16S Ribosomal DNA Restriction Analysis
... described species have been reported to ...this species were similar to those reported previously for this species (7, ...this species were found exclusively in head, neck, and thoracic ... See full document
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PCR - RFLP patterns for the differentiation of the Fusarium species in virtue of ITS rDNA
... Fusarium species have been divided into 33 ...Fusarium species into 23 groups of which 19 groups included one member, one group included two members and three groups included three members of the Fusarium ... See full document
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Identification of Clostridium Species and DNA Fingerprinting of Clostridium perfringens by Amplified Fragment Length Polymorphism Analysis
... An amplified fragment length polymorphism (AFLP) method was applied to 129 strains representing 24 different Clostridium species, with special emphasis on pathogenic clostridia of medical or veterinary ... See full document
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IDENTIFICATION OF CYMBOPOGON SPECIES BY USING RAPD TECHNIQUE
... ladder DNA as a standard molecular weight size marker, stained and photographed using gel documentation ...and analysis was done by present (+) and absent (-) ... See full document
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Identification of Leishmania Species Causing Cutaneous Leishmaniasis Using Random Amplified Polymorphic DNA (RAPD-PCR) in Kharve, Iran
... Previous attempts to classify the Leishmania parasite in Razavi Khorasan Province (9) were based on clinical and epidemiological signs. It was previously thought that only dry cutaneous leishmaniasis was present in ... See full document
5
Sequence Analysis of the Ribosomal DNA Intergenic Spacer 1 Regions of Trichosporon Species
... 310 DNA sequencer with an ABI PRISM BigDye Terminator Cycle Sequencing kit (Ap- plied Biosystems) according to the manufacturer’s ...Trichosporon species and their respective DDBJ accession numbers are ... See full document
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Bacterial Identification, Clinical Significance, and Antimicrobial Susceptibilities of Acinetobacter ursingii and Acinetobacter schindleri, Two Frequently Misidentified Opportunistic Pathogens
... The species belonging to the Acinetobacter genus are currently reported as opportunistic pathogens in hospitalized patients with underlying ...the Acinetobacter calcoaceticus- Acinetobacter ... See full document
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PCR strategy for identification and differentiation of small pox and other orthopoxviruses
... of amplified DNAs, the sequential order of nucleotides was determined by direct sequencing of PCR products, and then the sequences determined were compared with the original sequences ...procedure, ... See full document
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