[PDF] Top 20 Molecular Methods for Bacterial Strain Typing
Has 10000 "Molecular Methods for Bacterial Strain Typing" found on our website. Below are the top 20 most common "Molecular Methods for Bacterial Strain Typing".
Molecular Methods for Bacterial Strain Typing
... This method is widely used for phylogenetic studies and typing of bacteria. The method is based on PCR and sequencing of fragments within a number of (six to seven) housekeeping genes in the entire ... See full document
7
Review on Molecular Typing Methods of Pathogens
... total bacterial DNA restriction patterns, which was first developed by Schwartz and Cantor at Columbia University in 1984 ...of molecular biology by making possible the separation of large DNA ... See full document
7
Comparison of Molecular Typing Methods for Characterization of Staphylococcus epidermidis: Proposal for Clone Definition
... SCCmec typing are ...a strain with a characteristic SmaI PFGE restriction ...SCCmec typing results were added may be related to the existence of exclusive restriction-modification ... See full document
12
Dissemination of Community Acquired Methicillin Resistant Staphylococcus aureus Clones in Northern Norway: Sequence Types 8 and 80 Predominate
... MLST. MLST identified 13 STs among the 67 isolates (Ta- ble 2). No new STs were detected. Six STs were each repre- FIG. 1. PFGE dendrograms representing the genetic relatedness of 26 ST8-MRSA isolates (left) and 13 ... See full document
7
Molecular typing methods used in studies of Mycobacterium tuberculosis in Iran: a systematic review
... a molecular mark- er relates directly to its ...sirable molecular marker should be short enough to separate unrelated samples from each other and on the other hand be long enough to be able to find the ... See full document
9
Whole Genome Mapping: a New Paradigm in Strain Typing Technology
... Bacteria, parasites, yeasts, and other fungi have been successfully analyzed by WGM (18–22). The organisms are gently lysed to obtain genomic high-molecular-weight DNA that is, on average, 250 kb or greater. The ... See full document
5
Discriminatory Power and Reproducibility of Novel DNA Typing Methods for Mycobacterium tuberculosis Complex Strains
... DNA typing (36). However, identification of myco- bacterial strains has since improved by the use of chromosomal deletions (10, 28, 44, 48), SNPs (28), and sequencing of the 16S rRNA gene DNA (8, ... See full document
11
Application of Whole Genome Sequencing for Bacterial Strain Typing in Molecular Epidemiology
... determining bacterial relatedness (pulsed-field gel electrophoresis [PFGE]) remains essentially unchanged 20 years after its ...explored bacterial whole-genome sequencing (WGS) as an alternative approach ... See full document
8
Concordance of Helicobacter pylori Strains within Families
... gastroscopy. Bacterial isolates were typed with random amplified polymorphic DNA and PCR- restriction fragment length polymorphism of the genes ureA-B, glmM, or ...a bacterial virulence factor, was ... See full document
5
Comparison of Strain Typing Results for Clostridium difficile Isolates from North America
... third molecular technique used in this study for typing isolates of ...epidemic strain of ...epidemic strain is classified as toxinotype III (38), the multicenter typing study reported ... See full document
7
Tuberculosis Control and Role of Molecular Epidemiology Studies in Iran: A Systematic Review
... using molecular typing methods can evaluate transmission patterns and risk factors, identify transmitted cases of MDR-TB, and determine transmission patterns within human populations ...decades ... See full document
11
16S Ribosomal DNA Typing for Identification of Pathogens in Patients with Bacterial Keratitis
... Representative case patient. A 39-year-old female (patient 8; Fig. 2) with a history of herpes simplex keratitis managed with chronic low-dose fluorometholone suspension and triflu- ridine drops was referred to the ... See full document
5
DNA typing of isolates associated with the 1988 sporotrichosis epidemic
... the source of the 1988 sporotrichosis epidemic by using molecular DNA typing methods to compare the clinical and environmental isolates associated with the outbreak.. Also, the possible [r] ... See full document
5
Genetic source tracking of an anthrax outbreak in Shaanxi province, China
... genotyping methods are required not only to assist microbial forensics to track outbreaks back to their origins, but also for facilitating epidemiological studies in order to reduce the risk of an outbreak or ... See full document
8
Utility of New 24 Locus Variable Number Tandem Repeat Typing for Discriminating Mycobacterium tuberculosis Clinical Isolates Collected in Bulgaria
... Molecular typing of Mycobacterium tuberculosis complex iso- lates is a useful tool for epidemiological studies at different ...standardized molecular typing method for ...(RFLP) typing, ... See full document
7
Serogroup C meningococci in Italy in the era of conjugate menC vaccination
... molecular size standard. The gel was stained with 2 mg/ mL ethidium bromide, photographed under UV light and digitized with Gel Doc 2000 system apparatus (Bio-Rad, USA). The method applied for VNTR has been ... See full document
8
Evaluation of Mycobacterial Interspersed Repetitive Unit Variable Number Tandem Repeat Analysis and Spoligotyping for Genotyping of Mycobacterium bovis Isolates and a Comparison with Restriction Fragment Length Polymorphism Typing
... A combination of spoligotyping and MIRU-VNTR typing offers some advantages over MIRU-VNTR typing alone. A few VNTR profiles were common to more than one spoligotype (Table 3) and were identified in isolates ... See full document
5
Culture Confirmed Reinfection of a Person with Different Strains of Borrelia burgdorferi Sensu Stricto
... of strain B31 as a standard, was ...the strain in one pair of cultures was identical to the known strain B31 used as the ...a strain identical to that of the other member and different from ... See full document
5
Application of a numerical index of discriminatory power to a comparison of four physiochemical typing methods for Candida albicans
... Four typing methods for the strain differentiation of Candida albicans morphotyping, resistotyping, extracellular enzyme production, and carbon source assimilation reactions were compare[r] ... See full document
5
Multilocus Sequence Typing versus Pulsed Field Gel Electrophoresis for Characterization of Extended Spectrum Beta Lactamase Producing Escherichia coli Isolates
... of changes detected by PFGE and MLST. PFGE examines both nucleotide changes that are in specific restriction sites and changes that involve large insertions or deletions of DNA, while MLST detects nucleotide changes ... See full document
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