[PDF] Top 20 Use of Variable Number Tandem Repeat Typing To Differentiate Mycobacterium tuberculosis Beijing Family Isolates from Hong Kong and Comparison with IS6110 Restriction Fragment Length Polymorphism Typing and Spoligotyping
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Use of Variable Number Tandem Repeat Typing To Differentiate Mycobacterium tuberculosis Beijing Family Isolates from Hong Kong and Comparison with IS6110 Restriction Fragment Length Polymorphism Typing and Spoligotyping
... on variable numbers of tandem repeats (VNTRs) is a promising PCR-based molecular typing method for ...M. tuberculosis isolates (8, 20, 28, ...the isolates can be typed for ... See full document
7
Discordance between Mycobacterial Interspersed Repetitive Unit Variable Number Tandem Repeat Typing and IS6110 Restriction Fragment Length Polymorphism Genotyping for Analysis of Mycobacterium tuberculosis Beijing Strains in a Setting of High Incidence of Tuberculosis
... IS6110 restriction fragment length polymorphism (RFLP) genotyping is the most widely used genotyping method to study the epidemiology of Mycobacterium ...the IS6110 RFLP ... See full document
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Evaluation of Mycobacterial Interspersed Repetitive Unit Variable Number Tandem Repeat Analysis and Spoligotyping for Genotyping of Mycobacterium bovis Isolates and a Comparison with Restriction Fragment Length Polymorphism Typing
... However, spoligotyping does not differentiate ...the Mycobacterium tuberculosis complex ge- nome, described as mycobacterial interspersed repetitive units, may show polymorphism of the ... See full document
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Comparison of a Semiautomated Commercial Repetitive Sequence Based PCR Method with Spoligotyping, 24 Locus Mycobacterial Interspersed Repetitive Unit–Variable Number Tandem Repeat Typing, and Restriction Fragment Length Polymorphism Based Analysis of IS6110 for Mycobacterium tuberculosis Typing
... M. tuberculosis stricto sensu clinical isolates and the H37Rv reference strain (French National Reference Center for Mycobacteria) were ...MDR isolates previ- ously characterized by ... See full document
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Evaluation of the Epidemiological Relevance of Variable Number Tandem Repeat Genotyping of Mycobacterium bovis and Comparison of the Method with IS6110 Restriction Fragment Length Polymorphism Analysis and Spoligotyping
... results from the lack of sufficiently informative molecular methods for typing ...to Mycobacterium tuberculosis, restriction fragment length polymorphism ... See full document
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Genetic Diversity of Mycobacterium africanum Clinical Isolates Based on IS6110 Restriction Fragment Length Polymorphism Analysis, Spoligotyping, and Variable Number of Tandem DNA Repeats
... africanum isolates were characterized by a specific spoligotyping pattern that was intermediate be- tween those of ...M. tuberculosis and ...(M. tuberculosis) and spac- ers 39 to 43 ... See full document
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Comparison of Variable Number Tandem Repeat and IS6110 Restriction Fragment Length Polymorphism Analyses for Discrimination of High and Low Copy Number IS6110 Mycobacterium tuberculosis Isolates
... widespread use of IS6110-RFLP, this method is both technically demanding and time ...of typing data would be a simple typing method, which produces a digital ...profile. Variable ... See full document
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Genetic Diversity of Mycobacterium tuberculosis Isolates from a Tertiary Care Tuberculosis Hospital in South Korea
... clinical isolates of M. tuberculosis from the National Masan Tuberculosis Hospital by spoligotyping, IS6110 restriction fragment length polymorphism ... See full document
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Evaluation of Semiautomated IS6110 Based Restriction Fragment Length Polymorphism Typing for Mycobacterium tuberculosis in a High Burden Setting
... clinical isolates of Mycobacterium tuberculosis has improved our understanding of the epidemiology and patterns of transmission of tuberculosis (TB) (1, ...(IS6110)-based ... See full document
6
Variable Number Tandem Repeat Typing of Mycobacterium tuberculosis Isolates with Low Copy Numbers of IS6110 by Using Mycobacterial Interspersed Repetitive Units
... of Mycobacterium tuberculosis isolates is useful for determining the extent of recent transmission in a community and the potential risk factors for recent transmis- sion, for identifying previously ... See full document
11
Molecular Characterization of Mycobacterium tuberculosis Isolates from Different Regions of Bulgaria
... Mycobacterium tuberculosis isolates from different regions of Bulgaria were studied by a variety of molecular typing ...oligonucleotide typing (spoligotyping), the 113 ... See full document
5
Evaluation of New Variable Number Tandem Repeat Systems for Typing Mycobacterium tuberculosis with Beijing Genotype Isolates from Beijing, China
... proposed variable-number tandem-repeat (VNTR) typing system, which includes a basic 15-locus set and a high-resolution 24-locus set ...of Mycobacterium tuberculosis ... See full document
5
Clustering of Beijing genotype Mycobacterium tuberculosis isolates from the Mekong delta in Vietnam on the basis of variable number of tandem repeat versus restriction fragment length polymorphism typing
... discriminating Beijing strains in the South of Vietnam and presumably ...in Hong Kong [4] (Table 1), whereas the HGDI of VNTR 2996, VNTR 4052, and VNTR 2165 were significantly higher than the ones in ... See full document
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Comparative Study of IS6110 Restriction Fragment Length Polymorphism and Variable Number Tandem Repeat Typing of Mycobacterium tuberculosis Isolates in the Netherlands, Based on a 5 Year Nationwide Survey
... VNTR typing. How- ever, this result does not reflect a comparison between only IS6110 RFLP and VNTR typing, because additional PGRS RFLP typing was used for strains with ⱕ5 copies of ... See full document
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Genetic Heterogeneity in Mycobacterium tuberculosisIsolates Reflected in IS6110 Restriction Fragment Length Polymorphism Patterns as Low Intensity Bands
... M. tuberculosis complex isolates analyzed from May 1997 to June 1998 in The Netherlands were screened for indications of mul- tiple infections expressed by the presence of low-intensity background ... See full document
7
Comparison of Variable-Number Tandem-Repeat Markers typing and IS1245 Restriction Fragment Length Polymorphism fingerprinting of Mycobacterium avium subsp. hominissuis from human and porcine origins
... MIRU-VNTR typing revealed six clus- ters (100% similarity) containing both human and por- cine isolates (Figure ...MIRU-VNTR typing methods amplify the confidence of the genetic relatedness between ... See full document
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A Combination of Two Genetic Markers Is Sufficient for Restriction Fragment Length Polymorphism Typing of Mycobacterium tuberculosis Complex in Areas with a High Incidence of Tuberculosis
... with polymorphism and their use as genetic markers for Mycobac- terium tuberculosis, strain differentiation by DNA typing has greatly facilitated epidemiological studies (7, 8, ...M. ... See full document
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Mycobacterial Interspersed Repetitive Unit Typing of Mycobacterium tuberculosis Compared to IS6110 Based Restriction Fragment Length Polymorphism Analysis for Investigation of Apparently Clustered Cases of Tuberculosis
... the IS6110 RFLP method has been carefully stan- dardized ...infinitely variable sizes still ...the fragment pattern is cumbersome and poorly transportable between ...centers. IS6110 RFLP has ... See full document
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Molecular Typing of Mycobacterium tuberculosis by Using Nine Novel Variable Number Tandem Repeats across the Beijing Family and Low Copy Number IS6110 Isolates
... the isolates included in this study, and their genomic location is illustrated ...ranges from 278 to 591 bp (Table 2). The number of alleles across these nine loci ranged from 2 to 8 (Table ... See full document
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Improved Multiple Locus Variable Number Tandem Repeat Assay for Staphylococcus aureus Genotyping, Providing a Highly Informative Technique Together with Strong Phylogenetic Value
... multiple-locus variable-number tandem-repeat (VNTR) analysis (MLVA) scheme for genotyping Staphylococcus ...sequence typing (MLST) and spa typing in a survey of 309 ...different ... See full document
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