28S rRNA
RNase L-Independent Specific 28S rRNA Cleavage in Murine Coronavirus-Infected Cells
... MHV-induced 28S rRNA ...specific 28S rRNA cleavage occurring early in MHV infection? It has been pro- posed that 28S rRNAs may serve as cytoplasmic “biosensors” regulating cellular ...
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Phylogenetic position of Loricifera inferred from nearly complete 18S and 28S rRNA gene sequences
... 18S rRNA (18S) and 28S rRNA (28S) genes sequences were amplified by PCR using previously published primer sets and conditions ...and 28S (3450 bp) sequences were deposited in GenBank ...
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The highly pathogenic H7N3 avian influenza strain from July 2012 in Mexico acquired an extended cleavage site through recombination with host 28S rRNA
... the 28S rRNA, there are in principle also several other organisms including other birds, horses, pigs and even humans that share the same 100% identical ...host 28S rRNA, one cannot ...
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Parasites of vectors Ixodiphagus hookeri and its Wolbachia symbionts in ticks in the Netherlands
... 16S rRNA gene yielded unspecific products, which were not used for further ...of 28S rRNA and wsp genes were ...for 28S rRNA as well as wsp ...divergent 28S rRNA ...either ...
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Genome of Sindbis Virus
... In light of the foregoing, it is difficult to understand how Sindbis RNA as well as WEE RNA sedimented at rates similar to that of 28S rRNA or viral 26S RNA in sucrose gradients prepared[r] ...
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The Stable 2-Kilobase Latency-Associated Transcript of Herpes Simplex Virus Type 1 Can Alter the Assembly of the 60S Ribosomal Subunit and Is Exported from Nucleus to Cytoplasm by a CRM1-Dependent Pathway
... of 28S rRNA, with two visible peaks, one for 60S and one for 80S ...a 28S but not an 18S rRNA probe ...the 28S rRNA similar to that found in mock- ...P-labeled 28S (B, C, ...
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The application of DNA sequence data for the identification of benthic nematodes from the North Sea
... proportion of variable sites as consequence of insertions and deletions, which are recognizable when observing the secondary structure of the complete 28S rRNA (Bae et al. 2010). Variation in secondary ...
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In vitro mRNA degradation system to study the virion host shutoff function of herpes simplex virus.
... Finally, although the wild-type vhs function induced accelerated in vitro turnover of both viral and cellular mRNAs, endogenous 28S rRNA was equally stable in extracts from mock-infected[r] ...
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Phylogenetic Location of the Spirometra Sparganum Isolates from China, Based on Sequences of 28S rDNA D1.
... Our core secondary structure model of 28S rRNA D1 region based on the Spirometra iso- late from Naning of China is shown in Fig. 2. We recognized totally fifteen stems, which were numbered 1–15. Positions ...
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Molecular Phylogeny and Proposal of Two New Species of the Emerging Pathogenic Fungus Saksenaea
... the 28S rRNA gene, and the elongation factor 1 ␣ (EF-1 ␣ ) gene, as well as by evaluation of relevant morphological and physiological characteristics of a set of clinical and environmental strains, we have ...
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Herpes Simplex Virus Type 1 2-Kilobase Latency-Associated Transcript Intron Associates with Ribosomal Proteins and Splicing Factors
... nuclear 28S rRNA in infected cells compared to unin- fected cells in our experiments, in contrast to -actin mRNA levels and distribution, the 28S ribosomal RNA is not altered significantly (our data ...
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The ribosomal transcription units of Haplorchis pumilio and H taichui and the use of 28S rDNA sequences for phylogenetic identification of common heterophyids in Vietnam
... and 28S) are particularly useful and reliable for this purpose [10, ...and 28S rRNA genes) separated by two internal transcribed spacers (ITS1 and ITS2) ...and 28S) have been widely used for ...
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Molecular phylogenetic history of eastern Mediterranean Alopiinae, a group of morphologically indeterminate land snails
... the complete nucleotide sequences of the nuclear internal transcribed spacers 1 (ITS1) and 2 (ITS2) and partial sequences of the nuclear 18S rRNA, 5.8S rRNA and 28S rRNA genes of species[r] ...
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Harasim, Thomas (2009): Die Rolle des nucleostemin-Gens in dem Prozess der Ribosomenbiogenese. Dissertation, LMU München: Fakultät für Biologie
... ausgeprägten 28S rRNA- Prozessierungsdefekt (Abbildung 21A, Spur ...der rRNA-Reifung keine off-target ...(Vergleiche 28S rRNA Bandenintensität in Spur 3 und ...von 28S- und ...
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Altered machinery of protein synthesis is region- and stage-dependent and is associated with α-synuclein oligomers in Parkinson’s disease
... 18S rRNA, 28S rRNA; reduced expression of several mRNAs encoding ribosomal protein (RP) subunits; and altered protein levels of initiation factor eIF3 and elongation factor eEF2 of protein synthesis ...
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Targeted gene knockin in zebrafish using the 28S rDNA-specific non-LTR-retrotransposon R2Ol
... In this study, we isolated an active form of sequence- specific LINE R2Ol from vertebrates and established for the first time an effective and highly sequence-specific retrotransposition system of R2Ol in zebrafish. This ...
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Metagenomic analysis of basal ice from an Alaskan glacier
... In this study, we examined the microbial community inhabiting the basal ice layer from Matanuska Glacier, Alaska, using 16S rRNA gene (rDNA), 16S rRNA tran- script (rRNA), and metagenomic sequencing ...
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Vol 69, No 3 (2017)
... The 28S rDNA and ITS sequences of the bolete CMUB39815 were compared with those available in the GenBank database. The sequences were 99% matches with all sequences of the same gene region of Borofutus dhakanus ...
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Study and exploitation of diverse soil environments for novel natural product discovery using metagenomic approaches
... 16S rRNA gene, NRPS and PKS biosynthetic genes allowed the identification of novel potential phylogenetic drivers of secondary metabolite diversity in the less characterized phyla Verrucomicrobia and Bacteroidetes ...
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Genomic analysis of a novel strain of Bacillus nealsonii, isolated from Surti buffalo rumen
... 16S rRNA based phylogenetic trees and identify closely related bacterial species ...16S rRNA gene for bacterial genera such as Bacillus and Pseudomonas ...
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