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gene families

The Caenorhabditis chemoreceptor gene families

The Caenorhabditis chemoreceptor gene families

... in gene number is an increased need for diversified chemosensory recep- tors expressed in specific sensory ...among gene families (Table ...four families. The other 15 chemoreceptor ...

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Prediction and verification of mouse tRNA gene families

Prediction and verification of mouse tRNA gene families

... in families, there are 23 expressed orphan tRNAs, which were found as a single gene ...and gene copy expansion in the human genome strongly argue that this is a functional ...tRNA gene ...

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Complex Networks Community Structure Division Algorithm Based on Multi-gene Families Encoding

Complex Networks Community Structure Division Algorithm Based on Multi-gene Families Encoding

... the gene expression; meanwhile, some characteristic gene expression programming operator such as chromosome inversion, restricted permutation etc were introduced in the ...

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Evolution of PE35 and PPE68 Gene Families in Mycobacterium: Roles of Horizontal Gene Transfer and Evolutionary Constraints

Evolution of PE35 and PPE68 Gene Families in Mycobacterium: Roles of Horizontal Gene Transfer and Evolutionary Constraints

... such gene families and the li- kelihood of ancient relationships between gene homologs, a simple filtering of genes based on a single measure such as e-value or bit-score would likely miss relevant ...

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Molecular investigations of gene families encoding foldase enzymes in wheat

Molecular investigations of gene families encoding foldase enzymes in wheat

... these gene-specific markers and quantitative trait loci related to dough ...the gene families encoding PDI and cyclophilin in wheat and assessment of these genes for inter- cultivar polymorphism that ...

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Neurotransmitter transporters: three important gene families for neuronal function

Neurotransmitter transporters: three important gene families for neuronal function

... distinct gene families to aid in temporal and spatial buffering of neurotransmitter and neurotransmitter metabolite concentrations and to allow cycling and recycling of transmitter molecules (Iverson and ...

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Update of human and mouse forkhead box (FOX) gene families

Update of human and mouse forkhead box (FOX) gene families

... human gene has undergone a recent duplication to a total of seven (FOXD4 and FOXD4L1 ! ...FOX gene expression or activity, notably proteasome inhibitors, appear to work well, much more basic research is ...

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Identification of conserved C2H2 zinc finger gene families in the Bilateria

Identification of conserved C2H2 zinc finger gene families in the Bilateria

... 39 families of genes (Table 1) which we propose represent ‘orthology groups’, as we infer that each group is descended from a single ancestral gene in the most recent common ancestor of Drosophila, ...

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The human crystallin gene families

The human crystallin gene families

... crystallin gene; however, the proposed name ψ-crystallin [82] has not been widely used perhaps be- cause of the potential confusion with the symbol for ...20-kb gene on Chr 5 separated by about 20 kb from ...

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Advances in Fusion Gene Research and Fusion Gene Families in Hematological Malignancies

Advances in Fusion Gene Research and Fusion Gene Families in Hematological Malignancies

... the gene expression signature and clinical manifestations of PAX5- JAK2-positive ALL are similar to that of BCR-ABL1-like ALL, so PAX5-JAK2 should be classified into the JAK2-FM rather than the ...

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GENETICS OF THE TUBULIN GENE FAMILIES OF PHYSARUM

GENETICS OF THE TUBULIN GENE FAMILIES OF PHYSARUM

... T h e independent, strong criterion used to indicate that the benD mutant phenotype is determined by a @-tubulin structural gene mu- tation is that the benD210 allele en[r] ...

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Revised computational metagenomic processing uncovers hidden and biologically meaningful functional variation in the human microbiome

Revised computational metagenomic processing uncovers hidden and biologically meaningful functional variation in the human microbiome

... of gene families (ranging from 1 to 20) showed an overall improved identification accuracy with MUSiCC-based normalization (P < ...20 gene families reached an identification accuracy of 94% ...

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A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers

A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers

... spruce gene dupli- cations relative to the GA split, was based on a large sam- ple of gene families (157), and given that our interpretation of the topologies was conservative because it was based on ...

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Genomic and Morphological Features of a Banchine Polydnavirus: Comparison with Bracoviruses and Ichnoviruses

Genomic and Morphological Features of a Banchine Polydnavirus: Comparison with Bracoviruses and Ichnoviruses

... The GfV genome contains members of two gene families identified earlier in other PDVs (Table 1 and Fig. 3). With 23 members, protein tyrosine phosphatases (PTPs) constitute the largest family of ...

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Discovery of novel transcripts and gametophytic functions via RNA seq analysis of maize gametophytic transcriptomes

Discovery of novel transcripts and gametophytic functions via RNA seq analysis of maize gametophytic transcriptomes

... ES-enriched gene set, regulation of transcription and small peptide DEFLs were overrepre- ...DEFL gene family in the embryo sac transcriptome, additional small peptide gene families were also ...

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Proteobacteria explain significant functional variability in the human gut microbiome

Proteobacteria explain significant functional variability in the human gut microbiome

... Functional redundancy deserves a closer look, however, because physiologically meaningful differences in gene abundances between healthy human microbiomes could easily have been missed. One primary factor may be ...

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Comparative genomics reveals the unique evolutionary status of Plasmodiophora brassicae and the essential role of GPCR signaling pathways

Comparative genomics reveals the unique evolutionary status of Plasmodiophora brassicae and the essential role of GPCR signaling pathways

... Gene families (ortholog, co-ortholog, and inparalog pairs) for ...the gene family analysis were aligned using MUSCLE (Edgar 2004), and the alignments were concatenated as a single data ...the ...

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Comparative transcriptomics of the nematode gut identifies global shifts in feeding mode and pathogen susceptibility

Comparative transcriptomics of the nematode gut identifies global shifts in feeding mode and pathogen susceptibility

... Results: To complement current knowledge about developmental and ecological differences with a better under- standing of their feeding modes, we have sequenced the intestinal transcriptomes of both nematodes. In total, ...

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Genomics.ppt

Genomics.ppt

... • Genes that make up gene families are hypothesized to have arisen from a common ancestral sequence through gene duplication... © 2011 Pearson Education, Inc.[r] ...

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The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima

The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

... less gene loss and shuffling than previously sequenced arthropods, and many orthologues of genes conserved from the bilaterian ancestor that have been lost in ...receptor gene family is absent from ...Dscam ...

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