Identification of the consensus sequence
Identification of a Novel Consensus Sequence at the Cleavage Site of the Lassa Virus Glycoprotein
... the arginine at position 256 or both arginine residues at posi- tions 256 and 257 and the leucine residues at positions 258 and 259 were individually replaced by alanine. Alanine mutations between positions 248 and 255 ...
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Peptide consensus sequence determination for the enhancement of the antimicrobial activity and selectivity of antimicrobial peptides
... acid consensus sequence identification as a platform for the design of peptides with an enhanced therapeutic index when compared with the par- ent ...similar sequence motifs most commonly ...
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Molecular Identification of Soil Bacteria by 16srDNA Sequence
... the consensus bacterial primer and separation of the resulting polymer chain reaction amplicon by cloning, temperature gradient electrophoresis are major ecological techniques that are used in the description of ...
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Noisy: Identification of problematic columns in multiple sequence alignments
... decreasing sequence length, it is important not to remove too many sites from an ...no consensus in the lit- erature regarding the tolerance of phylogenetic methods to multiple substitutions ...
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rpoB Gene Sequence Based Identification of Staphylococcus Species
... molecular identification of staphylo- cocci. Consensus PCR primers 2491F and 3241R were de- signed for the amplification of the region, and one additional primer, 2643F, was designed for ...partial ...
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Noisy: Identification of problematic columns in multiple sequence alignments
... decreasing sequence length, it is impor- tant not to remove too many sites from an align- ...no consensus in the literature regarding the tolerance of phylogenetic methods to multiple substitutions ...
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Consensus on the key characteristics of endocrine-disrupting chemicals as a basis for hazard identification.
... Establishing causal linkages between these molecu- lar events and adverse outcomes therefore requires an organizational framework to evaluate biologically plau- sible connections between responses at different levels and ...
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Mutagenesis-Induced, Large Fitness Variations with an Invariant Arenavirus Consensus Genomic Nucleotide Sequence
... Restricted Tropism of Vaccinia Virus and Insights into Its Cellular Receptor Based on studies documenting a broad tropism for infection of diverse types of cultured cells, vaccinia virus is thought to employ a ...
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Human herpesvirus 6B origin-binding protein: DNA-binding domain and consensus binding sequence.
... a consensus core OBP H6B -binding se- ...binding sequence of its counterpart (16), sug- gesting that they recognize different ...a consensus core sequence for OBP H6B -specific binding, two ...
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SSMART: Sequence-structure motif identification for RNA-binding proteins
... primary sequence and the structural properties of the RNA targets ...The sequence-structure motifs are represented as consensus strings over a degenerate alphabet, extending the IUPAC codes for ...
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Mutagenic analysis of the coronavirus intergenic consensus sequence.
... pentanucleotide repeats at the 5'-end genomic leader se- quence and at the intergenic region are the same sequence, the precise leader-body fusion site on MHV mRNA has not been identifie[r] ...
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Sentence Level Grammatical Error Identification as Sequence to Sequence Correction
... Further information about the task is available in the Shared Task report (Daudaravicius et al., 2016). 3 Related Work While this is the first year for a shared task focusing on sentence-level binary error ...
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Sentence-level grammatical error identification as sequence-to-sequence correction
... Further information about the task is available in the Shared Task report (Daudaravicius et al., 2016). 3 Related Work While this is the first year for a shared task focusing on sentence-level binary error ...
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Effect of intergenic consensus sequence flanking sequences on coronavirus transcription.
... This study demonstrated that for the 18-nucleotide-long, gene 6-7 intergenic sequence in DI RNA, the presence or absence of upstream and downstream flanking sequences, of the sizes studi[r] ...
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Nucleotide Sequence Based Multitarget Identification
... DNA sequence will consist of the DNA sequence of the downstream PCR primer plus a variable number of nucle- otides from the target DNA sequence beyond the 3⬘ end of the downstream PCR ...to ...
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Sequence Based Identification of Aerobic Actinomycetes
... lates. Identification of Actinomadura, Gordonia, Rhodococcus, Streptomyces, and Tsukamurella ...phenotypic identification of ...the sequence match in the GenBank database was of a different ...
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Development of global consensus sequence of HCV glycoproteins involved in viral entry
... a sequence analysis of E1 and E2 among genotypes 3a and 1a to determine conserved peptides in HCV that could be useful targets in the design of novel inhibitory compounds, thus reducing threats of HCV in ...
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Complex Word Identification as a Sequence Labelling Task
... [email protected] Abstract Complex Word Identification (CWI) is con- cerned with detection of words in need of sim- plification and is a crucial first step in a sim- plification pipeline. It has been shown that re- ...
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Identification of the interactive region by the homology of the sequence spectrum
... base sequence in genome was governed by some fundamental principles such as reverse-complement symmetry, multiple fractality and so on, and the anal- ytical method of the genome structure, the “Sequence ...
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Identification of functional RNA structures in sequence data
... of sequence and structure diversity was found in this study, suggesting that the natural diversity of RNA regulation is not solely due to differences between S15 protein ...
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