miRNAs target differentially expressed meristematic genes
Regulatory networks in non-small cell lung cancer: Connecting differentially expressed genes, miRNAs, and lncRNAs
... identify differentially expressed genes in two tissue types: NSCLC and normal lung ...Identified differentially expressed genes were functionally clustered and annotated with ...
95
Comprehensive Analysis Of Differentially Expressed mRNAs and miRNAs In Breast Cancer
... (miRNAs). miRNAs are a group of small non-coding RNAs, about 18-25 nucleotides in ...These miRNAs have the potential to regulate mRNA expression by suppressing the translational ...identify ...
73
Identification of aberrantly methylated differentially expressed genes targeted by differentially expressed miRNA in osteosarcoma
... several differentially methylated genes (DMGs) and differentially expressed genes (DEGs) in OS through bioinformatics analysis ...OS-related miRNAs, mRNAs and methylation ...
22
Computational Identification of miRNAs and Their Target Genes from Expressed Sequence Tags of Tea (Camellia sinensis)
... of miRNAs have been identified in recent years but there has been no report on miRNAs in ...identifying miRNAs in the tea ...plant miRNAs (so far publicly available) from Arabidopsis , rice ...
9
UNCOVER THE DIFFERENTIALLY EXPRESSED mirnas IN RESPONSE TO LIGHT SIGNALS IN LITHOSPERMUM ERYTHRORHIZON
... the miRNAs involved in the light-regulated shikonin formation still remain ...18 miRNAs were differentially expressed in the Dark vs White light small RNA libraries, and their putative ...
10
IDENTIFICATION OF DIFFERENTIALLY EXPRESSED GENES USING BI CLUSTERING
... identical. Target column contains the information about the samples that we have taken and we have to label the samples appropriately and when comparision of cell line and tissues of the sample is done, it defines ...
6
Detection of differentially expressed genes involved in osteoarthritis pathology
... Conclusions TWIST1, POU2F1, SMARCA4, and CREBBP may play an important role in OA pathology. Although the regulating interactions among them were obtained from bioinfor- matics analysis and require further validation, the ...
8
Microarray analysis of differentially expressed genes in the brains of tubby mice.
... candidate target genes of tub- by using microarray analysis and real-time ...the differentially expressed genes that we found are attractive target molecules that could be ...
7
Original Article Bioinformatics analysis of differentially expressed miRNAs in plasma of respiratory distress syndrome
... identified differentially expressed miRNAs, we predicted the target genes, lncRNA and ...target genes. LncRNA of XIST, circRNA of STT3B_hsa_circ_002001, target gene ...
7
Verification of genes differentially expressed in neuroblastoma tumours: a study of potential tumour suppressor genes
... direct target gene of PAX3/FKHR fusion gene in alveolar rhabdomyosarcoma and responsible for the anti-apop- totic function of PAX3/FKHR ...the genes discriminating between stroma-rich and stroma-poor ...
13
Tool for the identification of differentially expressed genes using a user-defined threshold
... microarray to identify a specific gene, therefore it is imperative that these targets are immobilized to the array in an orderly fashion. 4 mRNA is isolated from samples and reverse transcribed into cDNA which is labeled ...
92
Networking of differentially expressed genes in human cancer cells resistant to methotrexate
... coordinately expressed genes provide gene expression signatures that can indicate where to find targets suitable for gene ...of genes differentially expressed in common between the two ...
16
Profiling of miRNAs and target genes related to cystogenesis in ADPKD mouse models
... 13 differentially expressed miRNAs (DEmiRs) and their potential targets in agreement with cyst progression in both mouse ...its target genes—Wasf2, Dock1, and Itga4—in vitro and in ...
12
Pomelo II: Finding differentially expressed genes
... regulated genes in each two- class comparison and their intersection ...of genes that are up regulated in both the contrast between classes 0 and 1 and the contrast between ...
6
Statistical methods for ranking differentially expressed genes
... Background Microarray technology has revolutionized modern biological research by permitting the simultaneous study of genes com- prising a large part of the genome. The blessings stemming from this are ...
9
Identification of Differentially Expressed Genes in Papillary Thyroid Cancers
... specific genes, including tumor suppressor genes, oncogenes, apoptosis-associated genes and other predisposing ...However, genes, signaling pathways, and other basic mechanisms are cur- rently ...
8
Analysis of Differentially Expressed Genes in Neuroendocrine Carcinomas of the Lung
... of Differentially Expressed Genes in Neuroendocrine Carcinomas of the Lung Chigusa Okubo, MS,* Yuko Minami, MD,*§ Ryota Tanaka, MD,* 兩兩 Teruhito Uchihara, MD,*¶ Yoichi Anami, MD,* Shuichiroh Furuya, ...
7
mirnapath: a database of mirnas, target genes and metabolic pathways
... of target genes or upload a file and then select the corresponding organism and input data ...each target gene en- tered, the quantity of miRNAs that target the gene and the number of ...
7
Aberrantly methylated-differentially expressed genes and pathways in colorectal cancer
... methylated-differentially expressed genes and pathways in CRC by joint bioinformatics analysis of both gene expression and gene methylation microarrays, which may contribute to the finding of ...
10