Nucleotide polymorphism
THE ROLE OF GENETIC VARIATION SINGLE NUCLEOTIDE POLYMORPHISM T45G AND SINGLE NUCLEOTIDE POLYMORPHISM G276T OF THE ADIPONECTIN GENE IN FATTY LIVER PATHOMECHANISM ON OBESE MALE SUBJECT
... single nucleotide polymorphism (SNP) T45G and SNP G276T adiponectin gene was performed by allele polymerase chain reaction (PCR) amplification method from deoxyribonucleic acid (DNA) ...
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Software for tag single nucleotide polymorphism selection
... This paper reviews the theoretical basis for single nucleotide polymorphism (SNP) tagging and considers the use of current software made freely available for this task. A distinction between haplotype ...
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Frequency of M287T/AS3MT Single Nucleotide Polymorphism in an Iranian Population
... As2O3 polymorphism at position 287 (Met287Thr) critically influences arsenic ...single nucleotide polymorphism M287T (rs11191439) in exon 9 of the AS3MT in Iranians and to assess the difference in ...
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Functional Characterization of the OPRM1 A118G Single Nucleotide Polymorphism in Mice
... single nucleotide polymorphism (SNP) in exon 1 of the µ-opioid receptor gene (OPRM1), in which an adenine to guanine substitution (A118G) exchanges an asparagine for an aspartic acid at a putative ...
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Detecting single nucleotide polymorphism by single nucleotide polymorphism interactions in rheumatoid arthritis using a two step approach with machine learning and a Bayesian threshold least absolute shrinkage and selection operator (LASSO) model
... Rheumatoid arthritis (RA) is a chronic disease with known autoimmune pathophysiology. RA is a heritable condition and association studies have already identified a genomic region in chromosome 6 (the HLA region). While ...
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Original Article Nested ARMS-qPCR is a fast and cost-saving method for single nucleotide polymorphism genotyping in clinical service
... and polymorphism have some ...the nucleotide sequence, while a polymorphism is defined as a variant with a frequency above 1% ...Single Nucleotide Polymorphism (SNP) is a kind of DNA ...
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A General Overview of Detection Methods for Single Nucleotide Polymorphism
... single nucleotide polymorphism (SNP) has attracted much attention all over the world ...sequence polymorphism caused by single-nucleotide variation at the genome ...with polymorphism in ...
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Functional single nucleotide polymorphism-based association studies
... single nucleotide polymorphism (SNP) density in different types of functional ...a nucleotide in that region will be a variant by comparison with the rest of the genome (essentially, the relative SNP ...
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Association of single nucleotide polymorphism rs6983267 with the risk of prostate cancer
... single nucleotide polymorphism (SNP) rs6983267 and the risk of prostate ...rs6983267 polymorphism and risk of prostate ...rs6983267 polymorphism and risk of prostate cancer, subgroup analysis ...
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A functional single nucleotide polymorphism of SET8 is prognostic for breast cancer
... single-nucleotide polymorphism (SNP) locus rs16917496 (T > C) within the 3′-untranslated region (3′-UTR) of SET8 was associated with susceptibility in several malignancies including breast ...
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Comparison of tagging single nucleotide polymorphism methods in association analyses
... Development and application of methods using linkage- disequilibrium (LD) for single-nucleotide polymorphism (SNP) selection has empowered genetic epidemiologic studies. Tagging SNP selection methods ...
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Evaluation of single nucleotide polymorphism imputation using random forests
... BMC Proceedings Proceedings Evaluation of single nucleotide polymorphism imputation using random forests Daniel F Schwarz, Silke Szymczak, Andreas Ziegler and Inke R K?nig* Address Institut f?r Medizi[.] ...
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Patterns of Nucleotide Polymorphism Distinguish Temperate and Tropical Wild Isolates of Caenorhabditis briggsae
... sequence data provide several advantages over other common measures of genetic variation by using well- defined regions that are expected to conform to known mutational dynamics. Consequently, the extensive pop- ulation ...
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Genome-Wide Single-Nucleotide Polymorphism Map for Candida albicans
... Single-nucleotide polymorphisms (SNPs) are essential tools for studying a variety of organismal properties and processes, such as recombination, chromosomal dynamics, and genome rearrangement. This paper describes ...
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Computational Analysis of Single Nucleotide Polymorphism (SNPs) in HumanSLC5A1 Gene
... Abstract: Glucose galactose malabsorption (GGM) is an autosomal recessive disease manifesting within the first weeks of life. It is characterized by a selective failure to absorb dietary glucose and galactose from the ...
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Electrophoretic and nucleotide polymorphism at the esterase-6 locus of drosophila melanogaster
... With respect to the first explanation, there is little direct evidence relevant to possible selective forces acting on the minor axis amino acid polymorphisms. However, at least with respect to major axis amino acid ...
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Usefulness of Single Nucleotide Polymorphism Data for Estimating Population Parameters
... of effective population size and per-site mutation rate), which is related to the branch lengths of the reconstructed genealogy. With infinite amounts of data, ML models using SNP data are expected to produce consistent ...
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Association between neonatal resuscitation and a single nucleotide polymorphism rs1835740
... Aim: The aim of this work is to test if three single nucleotide polymorphisms (SNPs) implicated in glutamate homeostasis or signalling and cellular survival are associated with birth condition. Methods: This study ...
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Reconstituting the Frequency Spectrum of Ascertained Single-Nucleotide Polymorphism Data
... Assume that we know the panel depth for both ascer- tainment experiments and that the discovery panel is part of the sample used to obtain the frequency spec- trum (as in case 1).. Furth[r] ...
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Lack of correlation between in silico projection of function and quantitative real-time PCR-determined gene expression levels in colon tissue
... single nucleotide polymorphisms ...Single Nucleotide Polymorphism) and F-SNP (Functional Single Nucleotide Polymorphism) with experimentally derived geno- type-phenotype correlations to ...
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