Transcriptomic analysis of the E. festucae JmjC proteins
Genomic, transcriptomic and proteomic analysis of Pleurotus ostreatus secreted proteins
... Alternatively, proteins secreted by the UPS pathways do not require the presence of an SP sequence to guide the protein through the ER/Golgi pathway (Nickel & Seedorf, ...secreted proteins (Caccia et ...
172
Comprehensive transcriptomic analysis of heat shock proteins in the molecular subtypes of human breast cancer
... Shock Proteins (HSPs) are ubiquitous in living organisms and their expression is rapidly regulated by ...as proteins induced by heat, al- though it is now known that various types of physiological and/or ...
17
Comparative transcriptomic profile analysis of fed-batch cultures expressing different recombinant proteins in Escherichia coli
... Thus transcriptomic data reveals a more complex picture of the host response where the cell dyna- mically reacts to the stress associated with recombinant protein ...this analysis by two ...The ...
12
Transcriptomic analysis of prostate cancer progression
... 28 dysregulation is seen in the proteins and enzymes of key metabolic pathways during carcinogenesis (179). A characteristic change in energy metabolism, exhibited in many types of cancer cells, is the Warburg ...
274
High-throughput transcriptomic analysis of Pseudorabies virus
... 1.5 Gene expression cascade One main advantage of viral gene expression studies is the compact nature of the examined genomes, which, due to evolutionary pressure, function as tightly- regulated machineries with highly ...
98
Genomic and transcriptomic analysis of Lactobacillus rhamnosus LC705
... pathway analysis, pathway construction and defining enriched ...Pathway analysis is critical for understanding the biological functions of transcriptome ...of proteins is also done by servers with ...
71
Transcriptomic Profile of the Mexican Fruit Fly Anastrepha ludens under Desiccation Conditions and Structural Analysis of Geminiviral Proteins Rep and REn.
... Ramachandran analysis indicated that only 2/120 residues had unfavorable energetic ...conservation analysis indicated that the only residues that are highly conserved are ...
125
Proteomic and transcriptomic analysis of the Protozoan Parasite Neospora caninum
... This analysis has utilized the powerful technique of gel separation followed by liquid chromatography and mass spectrometry to confidently identify almost 20 % of the ...the proteins identified were ...
196
Transcriptomic analysis of rice in response to iron deficiency and excess
... domain-containing proteins, a bHLH domain-containing protein, heme peroxidases, isocitrate dehydrogenase, OsNAS3, a ferritin gene, OsZIP7 and OsZIP10, six peroxi- dases, and 43 sORFs (Additional file 2: Table ...
15
Transcriptomic analysis of probable asymptomatic and symptomatic alzheimer brains
... amyloidogenic proteins” in AD subjects Protein-protein interactions identified EGFR as a key hub gene in both the control and AsymAD groups; however, it achieves more con- nections with neighbouring proteins ...
13
Transcriptomic Analysis Of Petunia Hybrida In Response To Salt Stress
... Shock Proteins, stress hormones (ABA, ethylene) and sig- naling transduction ...genome. Transcriptomic gene expression has shed light on novel salt stress mechanisms and differentially expressed genes ...
130
Transcriptomic analysis of male and female Schistosoma mekongi adult worms
... several proteins involved in signal- ing pathways, including G protein-coupled receptors, tyrosine kinases and serine/threonine kinase pathways were upregulated in male ...
16
Transcriptomic Analysis of Vulvovaginal Candidiasis Identifies a Role for the NLRP3 Inflammasome
... regulator analysis of host gene expression during ...Regulator Analysis from the IPA software to identify sig- naling proteins whose downstream signaling pathways are poten- tially activated or ...
15
Transcriptomic analysis of Clostridium thermocellum ATCC 27405 cellulose fermentation
... The operon structure prediction for C. thermocellum ATCC 27405 by DOOR database ([23]; http://csbl1.bmb. uga.edu/OperonDB/) was used to estimate the correla- tion for co-regulation of genes in contiguous regions of the ...
15
Transcriptomic analysis of autistic brain reveals convergent molecular pathology.
... are proteins involved in synaptogenesis, in which allelic variants have been associated with autism and schizophrenia respectively 21; 22 ...co-expression analysis, and evidence for a convergence of ...
14
Transcriptomic analysis in pediatric spinal ependymoma reveals distinct molecular signatures
... molecular functions, the pSEPN miRNAs target a large number of transcripts responsible for cytoskeletal protein binding, kinase activity, and ion transporter activity. Genes located in membrane and synapse, as well as ...
12
Transcriptomic analysis of Sorghum bicolor responding to combined heat and drought stress.
... ‘unique’ transcripts identified a potential role for specific transcription factors including MYB78 and ATAF1, chaperones including unique heat shock proteins (HSPs) and metabolic pathways including polyamine ...
20
Integrative genomic and transcriptomic analysis of leiomyosarcoma
... Integrative genomic and transcriptomic analysis of leiomyosarcoma Priya Chudasama Leiomyosarcoma (LMS) is an aggressive mesenchymal malignancy with few therapeutic options. The mechanisms underlying LMS ...
15
A Theory of Genetic Analysis Using Transcriptomic Phenotypes
... may be hard to interpret in biological terms. Moreover, these methods may not utilize the rich structure inherent to biological systems that could place strong constraints on the problem under study to reduce the space ...
179
Pathway and Network Analysis of Transcriptomic and Genomic Data
... Palmer, C. D.; Pasko, D.; Pechlivanis, S.; Prokopenko, I.; Ried, J. S.; Ripke, S.; Shungin, D.; Stancakova, A.; Strawbridge, R. J.; Sung, Y. J.; Tanaka, T.; Teumer, A.; Trompet, S.; van der Laan, S. W.; van Setten, J.; ...
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