[PDF] Top 20 DALIGNER Performance Evaluation on Intel Xeon Phi Architecture
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DALIGNER Performance Evaluation on Intel Xeon Phi Architecture
... DALIGNER aligner for long read sequences finds local overlays and alignments in the datasets sequenced quickly and efficiently [6]. DALIGNER implementation process is divided into two steps. During the ... See full document
12
FINE TUNING OF PHYLIP ON INTEL XEON ARCHITECTURE
... The current optimization of PHYLIP application is limited to promlonly; whereas it has more than 30 other programs for DNA sequences, discrete characters, tree plotting, gene frequencies etc. The application can be ... See full document
6
Benchmarking of HPC Application on Many Core Architecture
... High Performance Computing (HPC) commonly referred to as supercomputing is being used continually to enhance a quality of ...computer architecture, it is becoming increasingly difficult to gauge the real ... See full document
8
An Experimental Evaluation of the OpenMP Thread Mapping for LU Factorisation on Xeon Phi Coprocessor and on Hybrid CPU-MIC Platform
... the performance properties of the different LU factorisation algorithms using relatively large shared memory ...with Intel Xeon Phi coprocessors were ...by Intel [11] shows a great ... See full document
16
EVALUATION OF OPENMP OPTIMIZATION IN HETEROGENEOUS COMPUTING MODE BY CODE OFFLOADING ON INTEL XEON PHI CO PROCESSOR
... Intel Xeon Phi architecture is based on different hardware design and programming principles than its closest contender NVidia Tesla and AMD in HPC market used for acceleration of general ... See full document
7
High-performance IP lookup using Intel Xeon Phi: a Bloom filters based approach
... the Intel Xeon Phi (Intel Phi) many-core coprocessor and on multi-core CPUs, and also evaluate the cooperative execution using both computing devices with several ...experimental ... See full document
18
Auto tuning Streamed Applications on Intel Xeon Phi
... the performance of a stream configuration (C1, ...best-available performance for an ...poor performance for dataset D14 by doubling the execution time over the non-streamed ...improved ... See full document
11
GNAQPMS v1.1: accelerating the Global Nested Air Quality Prediction Modeling System (GNAQPMS) on Intel Xeon Phi processors
... new architecture, geo-scientific models have been partially or fully ported to the GPU and MIC heterogeneous computation platforms to get better com- putation ...computation performance was improved on both ... See full document
14
Evaluating Kernels on Xeon Phi to accelerate Gysela application
... This Xeon Phi coprocessor is the first one, largely commercialized, that implements the Many Integrated Cores (MIC) ...This architecture is appealing, as the compiling and execution steps are quite ... See full document
21
Evaluation of DGEMM Implementation on Intel Xeon Phi Coprocessor
... our evaluation we have been testing usage of prefetching (both software and hardware) and their implications to achieved ...current Intel Xeon Phi architecture includes a hardware ... See full document
6
Intel Xeon Phi Coprocessor Architecture and Tools
... target performance for your application. Your application performance may also be bound by the PCIe bus ...the performance target is to use some standard Xeon Phi-optimized benchmarks ... See full document
220
Performance Study of Monte Carlo Codes on Xeon Phi Coprocessors — Testing MCNP 6.1 and Profiling ARCHER Geometry Module on the FS7ONNi Problem
... result, performance is diminished as execution pipelines are starved waiting for ...better performance, MPI with distributed memory model is not intended for use on a single node such as one MIC card, as ... See full document
6
Efficient performance of the Met Office Unified Model v8.2 on Intel Xeon partially used nodes
... Code generated by the compiler option -xHost targets the processor type on which it is compiled. On the old Solar Nehalem chip based system, this was equivalent to compiling with -xsse4.2. During the porting stage of our ... See full document
11
A Fast MHD Code for Gravitationally Stratified Media using Graphical Processing Units: SMAUG
... throughput architecture enabling the execution of many concurrent threads, rather than execut- ing a single thread very ...precision performance is important for many numerical appli- cations, computational ... See full document
27
Optimizing HPC Applications with Intel Cluster Tools
... application, its data structures, and the algorithms used. For the MiniMD application, the synchronization is required because the effect of force on one atom also has an effect on the source of the force. According to ... See full document
291
Parallelization of formal concept analysis algorithms
... Old and Priss have highlighted the need of developing algorithms that can handle large contexts (Old & Priss, 2004). There is no formal definition of what a large context is, however based on recent benchmarks a ... See full document
151
Evaluating the performance of legacy applications on emerging parallel architectures
... floating-point performance and that achieved by ap- plications has grown wider over time – today, a typical scientific application achieves only 5–20% of any given machine’s peak FLOP/s ...significant ... See full document
158
Robot Control Using Android Mobile with Solar Panel
... The fixed amount of on-chip ROM, RAM and number of I/O ports in microcontrollers makes them ideal for many applications in which cost and space are critical. The Intel 8052 is Harvard architecture, single ... See full document
6
BarraCUDA a fast short read sequence aligner using graphics processing units
... Figure 3 A comparison of alignment throughput of BWA and BarraCUDA in align real-life sequencing reads to the human genome. Two whole-genome shotgun libraries from the 1000 Genomes Project were used to compare the ... See full document
7
Automatic Fortran to C++ conversion with FABLE
... Table 1 shows absolute and relative runtimes of the LAPACK DSYEV procedure (see previous section) and a simplified structure factor calculation implementation as introduced in [11], which can also be found in the FABLE ... See full document
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