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[PDF] Top 20 Horizontal gene transfer is not a hallmark of the human genome

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Horizontal gene transfer is not a hallmark of the human genome

Horizontal gene transfer is not a hallmark of the human genome

... One reason that better BLAST results were found in the current study could well be that this study used data from May 2016, whereas Crisp et al.'s study used data from January 2013. A large number of additional genomes ... See full document

5

Opportunity and Means: Horizontal Gene Transfer from the Human Host to a Bacterial Pathogen

Opportunity and Means: Horizontal Gene Transfer from the Human Host to a Bacterial Pathogen

... between human L1 and nL1 sequences, combined with its absence in closely related Neisseria species, sug- gests that this HGT event happened relatively recently in evolu- tionary history and/or that the nL1 region ... See full document

5

Migration and horizontal gene transfer divide microbial genomes into multiple niches

Migration and horizontal gene transfer divide microbial genomes into multiple niches

... the horizontal gene flux initially increases up to a maximum at a 1:1 ratio of donors and recipients (C(t) ¼ 1 C(t) ¼ ...the gene flux, which gives the expected number of horizontal gene ... See full document

9

Contribution of Horizontal Gene Transfer to the Evolution of Saccharomyces cerevisiae

Contribution of Horizontal Gene Transfer to the Evolution of Saccharomyces cerevisiae

... mesenteroides (GenPept AAQ01774), L. lactis subsp. cremoris (GenPept AAQ01776), and L. lactis subsp. hordniae (GenPept AAQ01775). In order to rule out possible species misassign- ment or sequence contamination, we ... See full document

14

Evolution of gene fusions: horizontal transfer versus independent events

Evolution of gene fusions: horizontal transfer versus independent events

... of gene fusions often, if not always, passes through an intermediate stage of juxta- posed and co-regulated, but still distinct, genes within known or predicted ...juxtaposed gene pairs might have evolved ... See full document

13

The advantages and disadvantages of horizontal gene transfer and the emergence of the first species

The advantages and disadvantages of horizontal gene transfer and the emergence of the first species

... of horizontal gene transfer in early evolution, and reports that, under accurate replication, lower rates of HGT are ...each gene type represented in a genome, and a lower cost c for ... See full document

14

Horizontal transfer of a eukaryotic plastid-targeted protein gene to cyanobacteria

Horizontal transfer of a eukaryotic plastid-targeted protein gene to cyanobacteria

... on gene transfer from eukaryotes to prokaryo- ...prokaryote gene transfer are ...the transfer of eukaryotic alpha- and beta-tubulin subunits to the bacterium Pros- thecobacter ... See full document

8

Synthetic Fatty Acids Prevent Plasmid Mediated Horizontal Gene Transfer

Synthetic Fatty Acids Prevent Plasmid Mediated Horizontal Gene Transfer

... major horizontal gene transfer mechanism for the dissemination of antibiotic resistance genes among human ...inhibiting transfer of IncF, IncW, and IncH plasmids, moderately active ... See full document

8

Prokaryotic horizontal gene transfer within the human holobiont: ecological-evolutionary inferences, implications and possibilities

Prokaryotic horizontal gene transfer within the human holobiont: ecological-evolutionary inferences, implications and possibilities

... the human microbiota (recently reviewed, see ...the human gut microbiota found that most genes on these plasmids (other than replication-related and unclassifiable ones) happened to encode addiction modules ... See full document

14

Horizontal Gene Transfer of Functional Type VI Killing Genes by Natural Transformation

Horizontal Gene Transfer of Functional Type VI Killing Genes by Natural Transformation

... All sequenced isolates of V. cholerae encode a type VI secretion system (T6SS) weapon that can deliver toxic effector proteins directly into grazing predators, diverse proteobacteria, and other V. cholerae bacteria that ... See full document

11

Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi

Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi

... metabolism gene cluster of ...find gene clusters homologous to the ACE1 cluster in other fungal spe- cies, we used an algorithm that searched 26 fungal genomes for loci where at least three likely orthologs ... See full document

10

Phylogeographic support for horizontal gene transfer involving sympatric bruchid species

Phylogeographic support for horizontal gene transfer involving sympatric bruchid species

... The hypothesis of an endoparasite carrying the unusual cytb sequences deserves some attention. These sequences, however, are undoubtedly of bruchid origin, since a blast search of Gen- bank using the additional copy ... See full document

11

Role of Horizontal Gene Transfer in the Development of Multidrug Resistance in Haemophilus influenzae

Role of Horizontal Gene Transfer in the Development of Multidrug Resistance in Haemophilus influenzae

... for horizontal acquisition of resistance genes is important to under- stand how multidrug resistance ...conjugative transfer of mobile genetic elements and transformation of chro- mosomal genes, resulting ... See full document

13

Horizontal Transfer of a Retrotransposon from the Rice Planthopper to the Genome of an Insect DNA Virus

Horizontal Transfer of a Retrotransposon from the Rice Planthopper to the Genome of an Insect DNA Virus

... orizontal transfer (HT) of genetic material has been increasingly discovered be- tween different viruses and their eukaryotic hosts, and it shapes the evolution of the viruses and their hosts ...viral ... See full document

16

On the need for widespread horizontal gene transfers under genome size constraint

On the need for widespread horizontal gene transfers under genome size constraint

... of horizontal gene transfers in free-living prokaryotes is a simple but necessary consequence of two opposite effects: i) their apparent genome size constraint compared to typical eukaryote genomes ... See full document

10

Evolution of substrate specificity in a recipient's enzyme following horizontal gene transfer

Evolution of substrate specificity in a recipient's enzyme following horizontal gene transfer

... dynamic genome processes, which may include HGT and differential gene loss, positive selection may be needed to drive both (i) evolution of narrowing of enzyme substrate specificity from a generalist ... See full document

33

Understanding Horizontal Gene Transfer network in human gut microbiota

Understanding Horizontal Gene Transfer network in human gut microbiota

... different genome sequences to fusion a gene (see “Method” ...HGT-caused gene fusion events that are related to the HGT mechanism, as listed ...2186 gene fusion events, which involve 1280 genes ... See full document

20

Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes

Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes

... zontal transfer mechanisms and their evolution and then demonstrate the human lower gastro- intestinal tract as an environment in which horizontal gene transfer of resistance ... See full document

10

Horizontal Gene Transfer in Thermus spp.

Horizontal Gene Transfer in Thermus spp.

... Horizontal gene transfer (HGT) and symbiosis constitute a basis to explain the explosive evolution and dramatic adaptability to new environments shown by both prokaryotes and ...of genome ... See full document

14

Horizontally Acquired Quorum-Sensing Regulators Recruited by the PhoP Regulatory Network Expand the Host Adaptation Repertoire in the Phytopathogen Pectobacterium brasiliense

Horizontally Acquired Quorum-Sensing Regulators Recruited by the PhoP Regulatory Network Expand the Host Adaptation Repertoire in the Phytopathogen Pectobacterium brasiliense

... for horizontal acquisition in Dd3937 (DDA3937_RS20730), supported by both GC3 and DINT_KL, than in Pb1692 (AED-0002741), which indicates that Pectobacterium and Dickeya lineages acquired expR2 independently ...a ... See full document

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