[PDF] Top 20 Molecular Typing of Mycobacterium abscessus Based on Tandem Repeat Polymorphism
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Molecular Typing of Mycobacterium abscessus Based on Tandem Repeat Polymorphism
... Pasteur Mycobacterium abscessus MLST ...38 Mycobacterium abscessus strains based on MaVA results, created by using the Bionumerics ...with Mycobacterium massiliense, strain M24 ... See full document
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New Variable Number Tandem Repeat Markers for Typing Mycobacterium avium subsp paratuberculosis and M avium Strains: Comparison with IS900 and IS1245 Restriction Fragment Length Polymorphism Typing
... PCR-based typing markers consisting of variable-number tandem repeats (VNTRs) of genetic elements called mycobacterial interspersed repetitive units ...MIRU-VNTR typing, with a discriminatory ... See full document
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Polymorphism of Variable Number Tandem Repeats at Multiple Loci in Mycobacterium tuberculosis
... method based on restric- tion fragment length polymorphism (RFLP) of IS6110 inser- tion sequences has been established as the standard for typing strains of Mycobacterium ...RFLP- based ... See full document
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Molecular Characterization of Mycobacterium tuberculosis Isolates from Different Regions of Bulgaria
... of molecular typing tools. Based on spacer oligonucleotide typing (spoligotyping), the 113 strains were subdivided into 35 spoligotypes: 5 unique profiles and 15 profiles shared by two to 29 ... See full document
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Use of Variable Number Tandem Repeat Typing To Differentiate Mycobacterium tuberculosis Beijing Family Isolates from Hong Kong and Comparison with IS6110 Restriction Fragment Length Polymorphism Typing and Spoligotyping
... Typing based on variable numbers of tandem repeats (VNTRs) is a promising PCR-based molecular typing method for ...VNTR typing with mycobacterial interspersed repetitive ... See full document
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High Genetic Diversity Revealed by Variable Number Tandem Repeat Genotyping and Analysis of hsp65 Gene Polymorphism in a Large Collection of “Mycobacterium canettii” Strains Indicates that the M tuberculosis Complex Is a Recently Emerged Clone of “M canettii”
... In the last few years, an exceptional collection of 43 smooth strain variants of M. tuberculosis, originating from the Republic of Djibouti, has been constituted. The very rare instances of such strains reported before ... See full document
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Diversity of Potential Short Tandem Repeats in Mycobacterium leprae and Application for Molecular Typing
... no polymorphism which may have little or no long-term epi- demiological ...a tandem re- peat from the microsatellite class have been called simple sequence contingency ...the repeat element during ... See full document
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Comparison of Two Highly Discriminatory Molecular Fingerprinting Assays for Analysis of Multiple Aspergillus fumigatus Isolates from Patients with Invasive Aspergillosis
... several typing techniques have been described previously. Pat- tern-based techniques, such as random amplified polymorphic DNA (RAPD) analysis (2, 13), restriction fragment length polymorphism (RFLP) ... See full document
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Clustering of Tuberculosis Cases Based on Variable Number Tandem Repeat Typing in Relation to the Population Structure of Mycobacterium tuberculosis in the Netherlands
... length polymorphism (RFLP) and standard 24-locus VNTR typing (13, 14) at the RIVM or by Genoscreen ...(Lille). Molecular data were matched with demographic data using the date of birth, sex, postal ... See full document
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Molecular Typing of Mycobacterium tuberculosis Based on Variable Number of Tandem DNA Repeats Used Alone and in Association with Spoligotyping
... VNTR typing have always been performed on N-cetyl-N,N,N- trimethyl ammonium bromide-purified DNA with fixed DNA concentrations within a range of 50 to 200 ng, which certainly helps increase the reproducibility of ... See full document
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Comparative Study of IS6110 Restriction Fragment Length Polymorphism and Variable Number Tandem Repeat Typing of Mycobacterium tuberculosis Isolates in the Netherlands, Based on a 5 Year Nationwide Survey
... of Mycobacterium tuberculosis isolates has been applied for the investigation of epidemiological links between tuberculosis (TB) cases in several countries since DNA typing techniques were developed in the ... See full document
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Use of Multilocus Variable Number Tandem Repeat Analysis for Typing Mycobacterium avium subsp paratuberculosis
... by Mycobacterium avium ...a molecular typing method to facilitate meaningful comparative DNA fingerprinting of ...variable-number tandem-repeat analysis (MLVA) was explored and compared ... See full document
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Multilocus Variable Number Tandem Repeat Typing of Mycobacterium ulcerans
... of Mycobacterium ulcerans contributes to the poorly understood epidemi- ology of ...number tandem repeat (VNTR) sequences as novel polymorphic elements in the genome of this ...one ... See full document
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Mycobacterial Interspersed Repetitive Unit Typing of Mycobacterium tuberculosis Compared to IS6110 Based Restriction Fragment Length Polymorphism Analysis for Investigation of Apparently Clustered Cases of Tuberculosis
... of polymorphism in the number of copies of tandem repeat sequences is an invaluable tool for the genotyping of higher ...number tandem repeats (VNTR), and used to type ...notably, ... See full document
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Development of Multiple Locus Variable Number Tandem Repeat Analysis for Molecular Typing of Mycoplasma pneumoniae
... little polymorphism can be found in ...for molecular typing (4). Among the new geno- typing methods, multiple-locus variable-number tandem-re- peat (VNTR) analysis (MLVA) has ... See full document
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Comparison of a Variable Number Tandem Repeat (VNTR) Method for Typing Mycobacterium avium with Mycobacterial Interspersed Repetitive Unit VNTR and IS1245 Restriction Fragment Length Polymorphism Typing
... the typing of ...the Mycobacterium tuberculosis complex ...number tandem-repeat (VNTR) typing analysis using Myco- bacterium avium tandem repeats (MATR-VNTR), which has a high ... See full document
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Use of a PCR method based on IS6110 polymorphism for typing Mycobacterium tuberculosis strains from BACTEC cultures
... type Mycobacterium tuberculosis complex strains, most molec- ular methods are based on the detection of repetitive elements (4, ...polymorphic tandem repeats (MPTRs), the polymorphic GC-rich ... See full document
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The use of mycobacterial interspersed repetitive unit typing and whole genome sequencing to inform tuberculosis prevention and control activities
... Abstract: Molecular strain typing of Mycobacte- rium tuberculosis has been possible for only about 20 years; it has significantly improved our under- standing of the evolution and epidemiology of ... See full document
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Genotypic characterization of five subspecies of Mycobacterium kansasii
... Different molecular typing methods including restriction fragment length polymorphism (RFLP) analysis with the major polymorphic tandem repeat (MPTR) probe and the IS1652 probe, ... See full document
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First Worldwide Proficiency Study on Variable Number Tandem Repeat Typing of Mycobacterium tuberculosis Complex Strains
... , Mycobac- terium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, Victoria, Australia; Ramona Groenheit, Swedish Institute for Infectious Disease Control, Solna, Sweden; Marjo ... See full document
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