[PDF] Top 20 Structural Constraints on RNA Virus Evolution
Has 10000 "Structural Constraints on RNA Virus Evolution" found on our website. Below are the top 20 most common "Structural Constraints on RNA Virus Evolution".
Structural Constraints on RNA Virus Evolution
... G virus (HGV) or GB virus C (GBV-C) is newly discovered (17, 19), several observations suggest that it may have always infected humans and originated through coevolution with its primate ... See full document
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RNA structures and their molecular evolution in HIV : evolution of robustness in RNA structures and theoretical systems
... the constraints on rate be the same for each ...for RNA-Decoder where the prediction error increases with increasing total tree length[82], though total tree length does not correspond directly with ... See full document
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Mapping of positive selection sites in the HIV 1 genome in the context of RNA and protein structural constraints
... tidimensional constraints on HIV-1 Gag evolution [23] also points towards analyses that could benefit from the layers of information included in the current study with the goal of better identifying regions ... See full document
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Multiple Barriers to the Evolution of Alternative Gene Orders in a Positive-Strand RNA Virus
... the virus in terms of consistently maintaining rep- lication ...of constraints conspire to effectively limit the number of plausible trajectories to ...wild-type virus (Tromas et ... See full document
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Structural and phenotypic analysis of Chikungunya virus RNA replication elements
... of RNA secondary or higher-order structures within the CHIKV genome or their potential function as RNA replication elements during virus ...Sindbis virus (SINV), Semliki Forest virus ... See full document
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Deletion of Highly Conserved Arginine-Rich RNA Binding Motif in Cowpea Chlorotic Mottle Virus Capsid Protein Results in Virion Structural Alterations and RNA Packaging Constraints
... total RNA isolated from uninoculated systemic leaves failed to reveal the presence of any viral RNA (data not shown), con- firming that C3/ ⌬ 919 is incompetent to support systemic infec- ...919, ... See full document
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Structural Plasticity and Rapid Evolution in a Viral RNA Revealed by In Vivo Genetic Selection
... and evolution of sequence J in plant infec- tion could reflect more robust replication or an enhanced abil- ity to support rapid TCV movement ...genomic RNA and assessed 40 h later for plus-strand ...helper ... See full document
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Genome Variability and Capsid Structural Constraints of Hepatitis A Virus
... A virus (HAV) correlates with a lack of antigenic diversity; thus, there is only a single serotype of human ...viral RNA-dependent RNA polymerase and the absence of proofreading ...different ... See full document
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Structural Characterization of the Rous Sarcoma Virus RNA Stability Element
... the structural prediction, they are depicted on ...With constraints from SHAPE data alone, the RNAstructure program predicted six different structures, and Mfold returned four potential, similar ... See full document
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Constraints of Viral RNA Synthesis on Codon Usage of Negative-Strand RNA Virus
... for virus growth may place constraints on the evolution of ...stomatitis virus (VSV) is a prototypic NSV that carries five viral genes: nucleocapsid (N), phosphoprotein (P), matrix protein (M), ... See full document
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RNA Sequence Evolution With Secondary Structure Constraints: Comparison of Substitution Rate Models Using Maximum-Likelihood Methods
... other RNA sequences are often used in constructing molec- side of the pair restores the pairing ...deducing RNA secondary structures (Woese of RNA molecules then an understanding of the way in and ... See full document
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Structural characterization of virion proteins and genomic RNA of human parainfluenza virus 3.
... The M protein of HPIV3 has a molecular weight of 35 x 1 is associated with the envelope of the virion, and aggregates under low-salt conditions, and intrachain disulfide bonds affect its[r] ... See full document
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Structural analysis of a 1.7-kilobase mouse mammary tumor virus-specific RNA.
... NUSSE Department of Virology, Antoni van Leeuwenhoekhuis, The Netherlands Cancer Institute, Amsterdam, The Netherlands We have detected a mouse mammary tumor virus MMTV-specific 1.7kilob[r] ... See full document
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Structural comparisons of the nucleoprotein from three negative strand RNA virus families
... the RNA binding region of the VSV N protein have very different positions compared to the other structures (Fig- ure ...the RNA binding residues in the VSV N cavity could not be definitely ...The ... See full document
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RNA folding with hard and soft constraints
... the RNA, gene transcription and expression is regulated to allow adaptation to certain environmen- tal ...the RNA “switches” into a corresponding struc- tural state, stabilized by non-covalent binding, such ... See full document
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VP3, a Structural Protein of Infectious Pancreatic Necrosis Virus, Interacts with RNA-Dependent RNA Polymerase VP1 and with Double-Stranded RNA
... vitro-translated mutant by using the dsRNA pull-down assay. As shown in Fig. 7A, the presence of proteins in the RNA- bound fractions was analyzed, along with the corresponding in vitro-translated truncated VP3 ... See full document
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RNA Structural Elements Determine Frequency and Sites of Nonhomologous Recombination in an Animal Plus-Strand RNA Virus
... variable RNA viruses, RNA recombination significantly contributes to genetic variations which may lead to changes of virulence, adaptation to new hosts, escape from the host immune response, and emergence ... See full document
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Hepatitis C Virus RNA Replication Requires a Conserved Structural Motif within the Transmembrane Domain of the NS5B RNA-Dependent RNA Polymerase
... The significantly reduced colony formation efficiency sug- gested that viable chimeric clones had acquired compensatory changes. In order to identify such changes, selected clones were expanded, followed by RNA ... See full document
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Processing XPath Structural Constraints on GPU
... with structural constraints given by the axes parent-child (/) and ancestor-descendant ...these constraints takes longer than processing value ...value constraints must also be considered. ... See full document
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Structural Phosphoprotein M2-1 of the Human Respiratory Syncytial Virus Is an RNA Binding Protein
... for RNA binding capacity in Northern-Western assays showed that all were able to bind long RNAs ...of RNA binding ca- pacities of different amounts of unphosphorylated and phos- phorylated M2-1 protein ... See full document
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