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biochemical reaction

Parameter sensitivity analysis for biochemical reaction networks

Parameter sensitivity analysis for biochemical reaction networks

... Abstract: Biochemical reaction networks describe the chemical interactions occurring between molecular populations inside the living ...of biochemical networks can be a powerful tool in unravelling ...

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Using shifted Legendre scaling functions for solving fractional biochemical reaction problem

Using shifted Legendre scaling functions for solving fractional biochemical reaction problem

... It has been indicated in [6] and [7] that variational iteration and homotopy perturbation methods do not work for solving the classical biochemical reaction problem. Hence, the authors proposed modification ...

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Propagation of kinetic uncertainties through a canonical topology of the TLR4 signaling network in different regions of biochemical reaction space

Propagation of kinetic uncertainties through a canonical topology of the TLR4 signaling network in different regions of biochemical reaction space

... upstream reaction cascades acti- vated upon LPS ...the biochemical reaction space were first performed to identify differ- ent parameter configurations capable of reproducing the reported ...

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Inference of General Mass Action Based State Equations for Oscillatory Biochemical Reaction Systems Using k Step Genetic Programming

Inference of General Mass Action Based State Equations for Oscillatory Biochemical Reaction Systems Using k Step Genetic Programming

... tory biochemical reaction ...oscillatory biochemical reaction systems with high non- linearity from only the experimentally observed time-series data by using k -step ...oscillatory ...

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Numerical modeling for nonlinear biochemical reaction networks

Numerical modeling for nonlinear biochemical reaction networks

... equations, biochemical reactions, ...enzyme-substrate reaction is simulated by the Runge-Kutta of order four (RK4) and by Non-standard finite difference (NSFD) ...the biochemical reaction ...

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On Efficient Algorithms for Stochastic Simulation of Biochemical Reaction Systems

On Efficient Algorithms for Stochastic Simulation of Biochemical Reaction Systems

... next reaction firing and update the propensities after a reaction ...next reaction firing such as the linear search is asymptotically increasing with the number of re- actions in the ...

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Multi-level convergence of complex traits and the evolution of bioluminescence

Multi-level convergence of complex traits and the evolution of bioluminescence

... the biochemical production of light by a living organism, is generated by proteins called luciferases that facilitate the oxidation of substrates called ...the biochemical reaction and require the ...

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Online Full Text

Online Full Text

... The effectiveness of OHAM has been established by solving a singular boundary value problem of chemical/bio- chemical engineering, namely reaction cum diffusion process inside a permeable biocatalyst in which ...

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Conditions for duality between fluxes and concentrations in biochemical networks

Conditions for duality between fluxes and concentrations in biochemical networks

... a biochemical network modelling problem can have many theoretical biological applica- tions, in advance of experimental biological ...of biochemical reaction net- works, there has long been an ...

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Sanitary Biosecurity Test against Hospital Acquired Fungal Infections: The Role of Hemolymph from the Cochineal Insect

Sanitary Biosecurity Test against Hospital Acquired Fungal Infections: The Role of Hemolymph from the Cochineal Insect

... colorimetric biochemical reaction, compared to the positive controls such as Zymosan and spores of Aspergillus sp, that were lysates and with formation of a precipitate proper of the reaction itself ...

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Determine measurement set for parameter estimation in biological systems modeling

Determine measurement set for parameter estimation in biological systems modeling

... particular biochemical reaction systems, such that the unknown parameters can be inferred with the best possible statistical quality using the data collected from the designed ...

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Leaf area index identified as a major source of variability in modeled CO2 fertilization

Leaf area index identified as a major source of variability in modeled CO2 fertilization

... We aimed to analyze the CO2 fertilization effects for biochemical reaction L, leaf photosynthesis rate p, leaf-tocanopy scaling factor S, leaf area index LAI, sunlit leaf GPP GPPsun , sh[r] ...

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Journal of Instrumentation Technology

Journal of Instrumentation Technology

... specific biochemical reaction energy into an electrical form through the use of transduction ...of biochemical response into electrical signal is achieved through ...

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I  Quantal Effects in Biochemical Cooperativity and a Proposed Mechanism for the Differentiation of Calcium Signaling in Synaptic Plasticity  II  Evolutionary Algorithms for the Optimization of Methods in Computational Chemistry

I Quantal Effects in Biochemical Cooperativity and a Proposed Mechanism for the Differentiation of Calcium Signaling in Synaptic Plasticity II Evolutionary Algorithms for the Optimization of Methods in Computational Chemistry

... Gillespie’s stochastic simulation algorithm (SSA) has become synonymous with stochastic simulation of chemical reaction networks. Gillespie’s method is an ex- act method, meaning that it represents the ...

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Isolation and characterization of Sinorhizobium and Ensifer species isolated from root nodules of Vigna trilobata cultivars

Isolation and characterization of Sinorhizobium and Ensifer species isolated from root nodules of Vigna trilobata cultivars

... root nodules of Vigna trilobata plants Morphologically all the strains were rod shaped gram negative and mucus producing. All these strains were positive for biochemical tests such test, oxidase test, nitrate ...

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Biochemical indicators and systemic reaction times in male judo competitors during regular and pre-competition conditioning periods

Biochemical indicators and systemic reaction times in male judo competitors during regular and pre-competition conditioning periods

... about biochemical, muscular and neural indicators during regular and pre-competition conditioning training periods of the male judo athletes (at least the rank of first dan and over 10 years ...

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Clearance of Cellulosimicrobium cellulans Bacteremia in a Child without Central Venous Catheter Removal

Clearance of Cellulosimicrobium cellulans Bacteremia in a Child without Central Venous Catheter Removal

... following biochemical reactions: catalase positive, reduction of nitrate, and hydrolysis of gelatin and esculin ...Coryne biochemical strip (BioMerieux) keyed out with the number 7572727, an excellent ...

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An Aerobic Bio-Hydrogen Production from Dairy Waste Water Treatment in Sequential Batch Reactor (ANSBR): Effect of Organic Loading Rate

An Aerobic Bio-Hydrogen Production from Dairy Waste Water Treatment in Sequential Batch Reactor (ANSBR): Effect of Organic Loading Rate

... fatty acids was observed at relatively shorter cycle period (6 h) at OLR 2.42 and 3 Kg COD/m 3 -day. While at 2.4 Kg COD/m 3 -day relatively delayed (8 h) and lower efficiency in VFA production was observed.Alkalinity ...

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Isolation and Characterization of Xanthomonas oryzae isolates from different regions of Midnapore district of West Bengal and their Ecofriendly management by some medicinal plant extracts

Isolation and Characterization of Xanthomonas oryzae isolates from different regions of Midnapore district of West Bengal and their Ecofriendly management by some medicinal plant extracts

... Egg yolk agar is an enriched non-selective and differential medium that contains egg yolk for presumptive identification. The egg yolk suspension allows for the detection of lecithinase and lipase activity. The ...

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Effect of pH and Temperature on Iron Oxidation by Mesophilic Mixed Iron Oxidizing Microflora

Effect of pH and Temperature on Iron Oxidation by Mesophilic Mixed Iron Oxidizing Microflora

... as reaction (6) in mild acidic medium. Also, reaction (1) cannot be ignored as there was a slight change in colour from green to whitish brown colloidal suspension by forming ferrous hydroxide ...

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