interacting proteins
Ligand-dependent differences in estrogen receptor beta-interacting proteins identified in lung adenocarcinoma cells corresponds to estrogenic responses
... treated H1793 cells and ligand independent ERb-CALM interaction in A549 cell line (Figure 3B). These data provide the first evidence that ERb interacts with CALM. Previous studies established that CALM directly interacts ...
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Non-erythroid beta spectrin interacting proteins and their effects on spectrin tetramerization
... βII-C interacting proteins as well as of 7 proteins previously identified to interact with the tetramerization region of non-erythroid alpha spectrin (IP αII-N s) [1] on spectrin tetramer ...
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Encoding the states of interacting proteins to facilitate biological pathways reconstruction
... For example, we may want to add in the “state” of the interacting proteins the knowledge of the conformations assumed by the proteins. In fact, the amino-acid sequence of a protein determines its ...
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Grain width 2 (GW2) and its interacting proteins regulate seed development in rice (Oryza sativa L.)
... GW2-interacting proteins whose level and stability were regulated by GW2 ...several proteins were higher in gw2 mutant seeds than in wild-type seeds ...PGK proteins accumulated to high levels ...
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Multifaceted interactions and regulation between antizyme and its interacting proteins cyclin D1, ornithine decarboxylase and antizyme inhibitor
... its interacting proteins Based on the differential affinities determined among CCND1, ODC and AZI, a model of AZ binding to its interacting proteins is proposed here (Figure ...
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Improving Prediction of Self-interacting Proteins Using Stacked Sparse Auto-Encoder with PSSM profiles
... Prediction of self-interacting proteins (SIPs) is helpful for dissecting the execution of most important molecular processes in cells. A number of computational approaches have been developed to detect ...
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Revealing protein functions based on relationships of interacting proteins and GO terms
... between interacting proteins As reported, many proteins play functional roles that are different from their neighbors in the PPI ...unrelated proteins [23]. For instance, the function of ...
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Identification and Physiochemical Analysis of ERK Interacting Proteins Using Bio Computational Tools
... these proteins is little ...ERK interacting proteins using bio-computational ...interacting proteins. Physical and chemical parameters of these ERK interacting partners indicated ...
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Characterization of the Brain Proteasome and its Interacting Proteins and their Regulation by Neuronal Activity
... proteasome-interacting proteins identified from the rat cortex have diverse cellular roles (Table ...ubiquitylated proteins (Tax1BP1, p62/sequestosome 1) [118, 119] or N-end rule proteins ...
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Identification of Epstein-Barr Virus RK-BARF0-Interacting Proteins and Characterization of Expression Pattern
... The Epstein-Barr virus (EBV) BamHI A transcripts are a family of transcripts that are differentially spliced and can be detected in multiple EBV-associated malignancies. Several of the transcripts may encode ...
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Identification of self-interacting proteins by exploring evolutionary information embedded in PSI-BLAST-constructed position specific scoring matrix
... Self-interacting Proteins (SIPs) play an essential role in a wide range of biological processes, such as gene expression regulation, signal transduction, enzyme activation and immune ...self-interaction ...
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The Identification of Pcl1-Interacting Proteins That Genetically Interact With Cla4 May Indicate a Link Between G1 Progression and Mitotic Exit
... Pcl1-interacting proteins were identified: Ncp1, Hms1, and a novel ATPase dubbed ...these proteins interacts with Pcl1 in GST pull-down experiments and is specifically phosphorylated by Pcl1•Pho85 ...
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Differential regulation of Janus kinase 3 (JAK3) in bovine preovulatory follicles and identification of JAK3 interacting proteins in granulosa cells
... Effector proteins that contribute to JAK/ STAT events include the signal-transducing adapter molecules (STAMs), which facilitate the transcriptional activation of specific target genes, and the ...
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Identification of GABAC receptor-interacting proteins
... PSD-95 proteins are clearly involved in clustering ion channels and other im portant synaptic proteins, but there is little evidence that they interact directly with the cytoskeleton to anchor the structure ...
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Proteomic analysis of secretagogue-stimulated neutrophils implicates a role for actin and actin-interacting proteins in Rac2-mediated granule exocytosis
... identified proteins with negative ratios indicating reduced protein abundance ...identified proteins is graphically represented by scatter plot in Figure 5, which highlights the changes in protein abundance ...
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Identification of sensory-neuron-specific sodium channel Nav1.8 interacting proteins by yeast-two hybrid screen
... Most o f the sodium channel a-subunits are likely to be associated with accessory p subunits in vivo (reviewed in Isom, 2002). The a-subunit forms the central aqueous pore o f the channel while accessory P subunits ...
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Evolutionary Analysis of Rett Syndrome-Causing Proteins and Their Pathogenic Missense Point Mutations: Structural Order–Disorder, Post-Translational Modifications, Evolutionary Rates, and Interacting Proteins
... Sites of pathogenic RTT-associated missense mutation in human MeCP2, CDKL5, and FOXG1. 164[r] ...
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Photoreceptor sensory cilia and ciliopathies: focus on CEP290, RPGR and their interacting proteins
... cilia. Proteins in this zone include CEP290 [30,89-91], RPGR [30,92-99], RPGRIP1 [80], RPGRIP1L [100-105], IFT88 [106-108], KIF3A [109], KIF7 [110], and LCA5/ Lebercilin ...transport proteins mediate ...
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The role of fission yeast γ-tubulin interacting proteins in mitosis
... The function of this mitotic exit checkpoint in budding yeast can be easily imagined. It exists to prevent mitotic exit until the SPB has migrated into the daughter bud. The key regulator for this process is the ...
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A method to identify p62’s UBA domain interacting proteins
... misfolded proteins, ubiquitin-protein conjugation also has functions unrelated to proteasomal ...surface proteins into the endocytic pathway (15, ...ubiquitinated proteins are segregated ...
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