Replication Timing
The Element(s) at the Nontranscribed Xist Locus of the Active X Chromosome Controls Chromosomal Replication Timing in the Mouse
... late replication units along that chromosome (vertical red ...a replication-timing assay where BrdU had been incorporated into the chromosomal DNA late in the S phase and then subjected to red ...
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Mutational signature distribution varies with DNA replication timing and strand asymmetry
... with replication timing ...of replication (such as a negative correlation in the leading direction in ...with replication timing (irrespective of the replication strand) in all ...
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Periodic Variation of Mutation Rates in Bacterial Genomes Associated with Replication Timing
... ABSTRACT The causes and consequences of spatiotemporal variation in mutation rates remain to be explored in nearly all organisms. Here we examine relationships between local mutation rates and replication ...
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Replication timing and epigenome remodelling are associated with the nature of chromosomal rearrangements in cancer
... in timing were defined by the following process: differences in WA between replicates of the same cell line are representative of random noise and therefore can be used as an empirical null distribution for the ...
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Replication Timing Analysis of the Major Histocompatibility Complex on Human Chromosome 6
... influence replication? No-one has yet examined the interrelationship, if any, between linkage disequilibrium and replication ...recruit replication initiation signals (be they sequence- or ...
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Epstein-Barr Virus Episome Stability Is Coupled to a Delay in Replication Timing
... DNA replication during S ...significant replication defects and cause cell cycle ...the replication timing of OriP and destabilizes EBV genome ...EBV replication timing, histone ...
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Microdeletion syndromes disclose replication timing alterations of genes unrelated to the missing DNA
... allelic replication timing, the epigenetic alteration delineated by the deletion is not deletion-specific, and probably accom- panies any loss/gain of a whole chromosome or of a small chromosomal ...tion ...
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Murine esBAF chromatin remodeling complex subunits BAF250a and Brg1 are necessary to maintain and reprogram pluripotency-specific replication timing of select replication domains
... performed replication-timing analysis of BAF250a flox/flox OSKM and BAF250a − / − OSKM ...genome-wide replication timing profiles of three in- dependent AP-positive BAF250a −/− OSKM clones ...
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Investigating Histone Regulation Of Metazoan Replication Timing In Vivo.pdf
... and replication timing, we examined both diploid and polyploid replication in H3K9R and H4K16R ...phase replication itself in H4K16R ...simultaneous replication of euchromatic and ...
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Conservation of replication timing reveals global and local regulation of replication origin activity
... Replication timing profiles allow the analysis of chromosom- ally active replication origins; however, approximately half of all origins in ...
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DNA Replication timing in Arabidopsis thaliana.
... The spatio-‐temporal coordination of DNA replication is related to structural changes in DNA that coincide with its localization to a specific nuclear compartment during S-‐ phase. These changes are related to ...
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Regulatory and evolutionary signatures of sex-biased genes on both the X chromosome and the autosomes
... to replication timing data in different cell lines, based on the Spearman ’ s Rho between replication timing values and log2fc of gene expression between females and ...
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Regulation of Epstein-Barr Virus Origin of Plasmid Replication (OriP) by the S-Phase Checkpoint Kinase Chk2
... OriP replication timing and ...A replication timing assay was performed with D98/HR1 cells treated with DBH or control DMSO for 48 h prior to BrdU pulse-labeling, FACS, and IP-PCR ...
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Role of SmcHD1 in establishment of epigenetic states required for the maintenance of the X inactivated state in mice
... late replication state of the inactivated X ...its replication timing from early to late S phase as usual even in the absence of SmcHD1, the timing seems to revert earlier in the absence of ...
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The impact of chromatin modifiers on the timing of locus replication in mouse embryonic stem cells
... late replication [2,3], suggesting that early replication of lineage specifiers in undifferentiated ES cells is actively ...the replication timing profile of mouse ES ...early ...
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Static Timing Analysis (STA) of SAS Expander on Virtex7 FPGA by using Vivado
... Static Timing Analysis needs application of proper constraints, generating timing reports, and checking if timing met or ...improves timing. Synthesizing design for timing optimization ...
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Design and Implementation of CSR for DDR4 Memory Controller
... different timing parameter requirements for the command generation as per the JEDEC DDR4 SDRAM specification ...store timing value for both 1600MT/s and 3200MT/s speed memory, and group this value into ...
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An enquiry into the relation between components and their composition on desired performance and cost of pick&place robotic arms
... The hip motor connects with a gt2 timing belt system. The 16 teeth pulley at the motor side has a diameter of 14mm, and the backlash on this type of timing belt is 0.013mm giving a backlash angle of 0.053 0 ...
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Minimizing engine emissions using state feedback control with LQR and artificial intelligence fuel estimator
... emissions of three different fuels, which are Isooctane, Methane and Ethanol. The dataset contains 10500 samples, 3500 samples for each fuel. The training process used 60% of the data for training and 40% of data for ...
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High-Performance AI: A View from Systems and Frameworks
... • The INDYCAR Timing system supports retrieving timing data from the primary timing system – serial or sequential data feed for live data and report querying for historical or archived d[r] ...
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