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sequence analysis

Construction Sequence Analysis of Multistoried RCC Building

Construction Sequence Analysis of Multistoried RCC Building

... research efforts and designers attention. There is one area; however which has been ignored by many previous investigators, i.e. the effects of construction sequence analysis in a multistory frame. The ...

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MESSA: MEta-Server for protein Sequence Analysis

MESSA: MEta-Server for protein Sequence Analysis

... Section VII. Homologous structures and structure domains Spatial structure prediction is an important aspect of sequence analysis. The predicted structure is indicative of protein function: the presence of ...

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Mitochondrial DNA sequence analysis in Anabantoidei fish

Mitochondrial DNA sequence analysis in Anabantoidei fish

... DNA sequence analysis of cyto- chrome b gene has been employed to study the poly- geography of Sandelia capensis and ...(RFLP) analysis of mtDNA has proven to be effective in distinguishing between ...

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Signal processing methods for genomic sequence analysis

Signal processing methods for genomic sequence analysis

... The sequence of log-likelihood ratios obtained from these models have been processed using a bank of IIR lowpass filters, where the output signals were used to predict the exact locations of the CpG ...

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A  Cryptanalysis  of  HummingBird-2:  The  Differential  Sequence  Analysis

A Cryptanalysis of HummingBird-2: The Differential Sequence Analysis

... In this paper, we present the first cryptanalytic result on the full version of this cipher using two pairs of related keys, i.e., four keys. We discover that the differential sequences for the last invocation of the ...

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Comparative study of Chronological Construction Sequence Analysis and Conventional analysis

Comparative study of Chronological Construction Sequence Analysis and Conventional analysis

... Consider a typical floor (say C) of a frame shown in figure 4. Assuming the building is constructed one floor at a time, the C floor is constructed on the top of the frame that was completed so far [i.e., up to (C - 1) ...

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rpoB Sequence Analysis of CulturedTropheryma whippelii

rpoB Sequence Analysis of CulturedTropheryma whippelii

... rpoB sequence analysis has been shown to be a powerful tool for the accurate identification of enteric bacterial species (20), Mycobacterium ...rpoB sequence-based detection method for rifampin ...

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A Sequence Analysis of Nonverbal Behaviour and Deception

A Sequence Analysis of Nonverbal Behaviour and Deception

... new sequence of behaviours was ...accurate analysis of the sequence of ...of sequence analysis (Bakeman and Quera ...behaviour sequence analysis, future research can be ...

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Sequence Analysis and Organization of the Neodiprion abietis Nucleopolyhedrovirus Genome

Sequence Analysis and Organization of the Neodiprion abietis Nucleopolyhedrovirus Genome

... contiguous sequence was manually edited and ...BLAST analysis with BLASTP and PSI-BLAST against the NCBI nonredundant protein database (3), as well as RPS-BLAST against the CDD database ...Linear ...

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Whole genome sequence analysis of Mycobacterium suricattae

Whole genome sequence analysis of Mycobacterium suricattae

... Dippenaar, A, Parsons, S D C, Sampson, S L, van der Merwe, R G, Drewe, J A, Abdallah, A M, Siame, K K, van Pittius, N C G, van Helden, P D, Pain, A and Warren, R M (2015) Whole genome sequence analysis of ...

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NOVEL ALGORITHMS AND SOFTWARE FOR BIOLOGICAL SEQUENCE ANALYSIS

NOVEL ALGORITHMS AND SOFTWARE FOR BIOLOGICAL SEQUENCE ANALYSIS

... In order to utilize the full potential of DockoMatic, it should be used on a computing cluster, as it was designed. This allows one to manage large numbers of jobs at the same time, rather than being limited to local ...

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Comparative sequence analysis of human cytomegalovirus strains

Comparative sequence analysis of human cytomegalovirus strains

... Amino acid sequence comparison of selected areas within the gp58/116 gene of the laboratory strains AD169 and Towne with those of clinical isolate 1 PCR, 3 PCR, 4 PCR, 2 PCR, and 5 PCR c[r] ...

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Next generation sequence analysis for mitochondrial disorders

Next generation sequence analysis for mitochondrial disorders

... and analysis of the literature on the affected proteins can provide a relatively easy way to assess the significance of the new variants, integrated bioinformatic support seems very impor- tant for the successful ...

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RNA and DNA Sequence Analysis of the Human Transcriptome

RNA and DNA Sequence Analysis of the Human Transcriptome

... transcriptome information at the single-nucleotide level. The resolution afforded by next- generation sequencing technology has allowed for genome-wide studies on RNA editing in humans (J. B. Li et al. 2009; Peng et al. ...

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elPrep 4 : a multithreaded framework for sequence analysis

elPrep 4 : a multithreaded framework for sequence analysis

... One aspect specific to a sequencing application such as elPrep is that it needs to process hundreds of gigabytes of data, putting a tremendous pressure on memory management [6]. Most Common Lisp implementations currently ...

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Amino-terminal sequence analysis of alphavirus polypeptides.

Amino-terminal sequence analysis of alphavirus polypeptides.

... Comparison of the partial NH2-terminal sequences of 6K of SFV and 4.2K of Sindbis virus with the deduced amino acid sequence encoded by the 26S mRNA of each virus reveals that the genes [r] ...

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Sequence Analysis of the ank Gene of Granulocytic Ehrlichiae

Sequence Analysis of the ank Gene of Granulocytic Ehrlichiae

... acid sequence analyses described above and shown in Table 2 suggest the existence of three distinct groups of the HGE agent (Northeast United States, Upper Midwest United States, and European), with a high degree ...

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Application of Statistical Mirroring in Biological Sequence Analysis

Application of Statistical Mirroring in Biological Sequence Analysis

... the analysis of biological sequences due to an increasing interest in bioinformatics ...multiple analysis of biological ...on sequence alignment and dynamic programming techniques (Lunter, et ...

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Sequence Analysis Confirms a New Algal Class

Sequence Analysis Confirms a New Algal Class

... The Chloromorum sequences fell into a well-supported clade (bootstrap support in % (bt) = 100, posterior prob- abilities pp = 1) that was sister with no support to a mod- erately supported larger clade (bt = 61) ...

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Sequence analysis of human monoclonal autoantibodies

Sequence analysis of human monoclonal autoantibodies

... allowed analysis of Ig gene expression in a synchronously differentiating population of pre B cells (Levitt et a l 1980), whereas analysis of bone marrow provided information concerning a steady state, ...

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