[PDF] Top 20 Complete genome sequence of Geodermatophilus obscurus type strain (G-20T)

... Further Geodermatophilus strains were isolated from limestone [8,9] and rock varnish [10] in the Negev Desert, Israel, from mar- ble in Delos, Greece [8,9], from chestnut soil in Gar- dabani, Central Georgia [11], ... See full document

... species do not [3]. The metabolism of A. nitrofigilis is chemoorganotrophic; organic acids and amino acids are used as carbon sources but carbohy- drates are neither oxidized nor fermented [2]. All strains of the species ... See full document

... The genome was sequenced using a combination of Illumina and 454 sequencing platforms. All general aspects of library construction and sequencing can be found at the were assembled using the Newbler assembler ver- ... See full document

... bronchialis is tolerant to both 0.1 and 0.2% picric acid. G. bronchialis grows at 28°C and 37°C, but not at 45°C or 52°C [1]. G. bronchialis is positive for acetamidase, urease, nicotinamidase and pyra- ... See full document

... rRNA sequence under the maximum likelihood criterion [ 17 ] and rooted with the type strain of the family 'Fusobacteriaceae' The branches are scaled in terms of the expected num- ber of substitutions ... See full document

... pheno- type of the strain, either an alternative enolase-like enzyme or a novel metabolic pathway which directs the glycolytic flow towards the synthesis of pyruvate could be ... See full document

... The genome of ...The genome size of ...The G+C percentage is ...the genome are summarized in Table 3 , and genes belonging to COG functional categories are listed in Table 4 ... See full document

... 10. Liolios K, Mavromatis K, Tavernarakis N, Kyrpides NC. The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res 2008; 36: D475-D479. ... See full document

... nucleotides that are most likely reoxidized in D. acetoxidans by a proton-translocating NADH de- hydrogenase complex, which reduces menaqui- nones. The structure of the NADH dehydrogenase seems to be similar to complex I ... See full document

... Mhun_3140). Although little is known about the chemotactic abilities of M. hungatei, other than movement towards an essential nutrient, acetate [38], there are mul- tiple chemosensory genes present in the genome. ... See full document

... [5], strain 5174 (DSM 17142) was isolated from a forest pond near Braunschweig, Germany (16S rRNA gene accession AJ277896) [6], and strain 9974 (DSM 17143) was isolated as a contaminating chemotrophic ... See full document

... F. Complete Genome Sequence of a Novel Pararetrovirus Iso- lated from ...Sun G, Wang Y, Tao G, Shen Q, Cao W, Chang X, Zhang W, Shao C, Yi M, Shao S, et ...plete Genome ... See full document

... various secondary transporters belonging to the sodium:solute symporter family (Tagg_0251, Tagg_0258), the sodium:neurotransmitter sym- porter family (Tagg_0418) and the so- dium:dicarboxylate symporter family ... See full document

... coccaceae, inferred from 1,456 aligned 16S rRNA characters [12] under the maximum likelihood criterion [13, 14]. The tree was rooted with four members of the neighboring family Intrasporangia- ceae. The branches are ... See full document

... 95.6% sequence identity [9]. Cultivated strains with highest sequence similarity include a so far unpublished strain 794 (Y09565) from human clinical specimen ...(99.7% sequence identity) and ... See full document

... Eastern China [10], Northern Taiwan [11] and Iceland [12]. Interestingly, the genus Meiothermus is heterogeneous with respect to pigmentation. The yellow pigmented species also form a distinct group on the basis of the ... See full document

... The genome was sequenced using a combination of Sanger, 454 and Illumina sequencing platforms. All general aspects of library construction and se- quencing can be found at the sequencing data was assembled with ... See full document

... the genome se- quence revealed the presence of a complete fla gene cluster (Arcpr_1384 – Arcpr_1391) and the preflagellin peptidase FlaK gene (Arcpr_0277), ... See full document

... forest soil in Gerenzano (Italy). Cells are small, short rods that are motile by peritrichous fla- gella. They may form aggregates after a longer period of growth and, then as a typical charac- teristic, an undulate ... See full document

... bacteria able to perform iron reduction as are sev- eral of its close phylogenetic relatives such as De- ferribacter thermophilus or Geovibrio ferrireducens ? Attempts to test for this ability in the lab failed be- cause ... See full document