[PDF] Top 20 Non-contiguous finished genome sequence and description of Bartonella florenciae sp. nov.

... B. florenciae is an aerobic, rod- shaped, Gram-negative ...complete genome sequence and its annotation. The 2,010,844 bp-long genome con- tains 1,909 protein-coding and 46 RNA genes, including ... See full document

... rRNA sequence cutoff values [3] with the plethora of new information provided by high throughput genome sequencing and mass spec- trometric analyses of bacteria ... See full document

... The genome is 3,497,779 bp long (one chromo- some, no plasmid) with a 58.82% GC content (Ta- ble 3, Figure 5). Of the 2,742 predicted genes, 2,692 were protein-coding genes, and 50 were RNAs. A total of 1,885 ... See full document

... type strains within the quences were aligned using CLUSTALW, and phylogenetic inferences obtained using the maximum-likelihood method within the MEGA software. Numbers at the nodes are percentages of bootstrap values ... See full document

... night and then analyzed on the cluster through the gsRunBrowser and Newbler Assembler (Roche). A total of 255,758 and 256,082 passed filter wells were obtained for the shotgun and paired-end strategies, respectively, and ... See full document

... The genome is 4,186,486 bp long (one chromo- some but no plasmid) with a 59.73% GC content (Table 3 and Figure 5). Of the 3,901 predicted genes, 3,847 were protein-coding genes, and 54 were RNAs. A total of 2,924 ... See full document

... The genome is 3,199,090 bp long with a 39.26% GC content (Table 4, Figure 7). Of the 3,326 pre- dicted genes, 3,240 were protein-coding genes, and 86 were RNAs. A total of 2,425 genes (74.8%) were assigned a ... See full document

... complete genome sequence and annotation. The 3,425,960 bp long genome (1 chromo- some but no plasmid) contains 3,064 protein-coding and 49 RNA ... See full document

... are non- endospore forming and are ...the genome is 36.40%. The 16S rRNA and genome sequences are deposited in Genbank under acces- sion numbers JX424771 and CAVG00000000, re- ... See full document

... and TMHMM [53] were used to predict signal pep- tides and transmembrane helices, respectively. ORFans were identified if their BLASTP E-value was lower than 1e-03 for alignment length greater than 80 amino acids. If ... See full document

... complete genome sequence and annotation. The 4,006,766 bp long genome (1 chromosome but no plasmid) exhibits a low G+C content of 36% and contains 3,956 protein-coding and 82 RNA genes, including 9 ... See full document

... massiliosenegalensis sp. nov., a new species within the genus ed from the fecal flora of a healthy Senegalese patient. B. massiliosenegalensis is an aerobic Gram-positive rod-shaped bacterium. Here we ... See full document

... 4,616,135 bp long (1 chromosome, but no plas- mid) with a 34.10% G + C content (Figure 6 and Table 4). Of the 4,519 predicted genes, 4,432 were protein-coding genes, and 87 were RNAs. Eight rRNA genes (one 16S rRNA, one ... See full document

... 3,735,762 bp long (1 chromosome, but no plas- mid) with a 27,98% G + C content of (Figure 6 and Table 4). Of the 3,916 predicted genes, 3,843 pro- tein-coding genes, and 73 were RNAs. Eight rRNA genes (one 16S rRNA, one ... See full document

... complete genome sequence and annotation. The 5,431,633 bp long genome (1 chromosome but no plasmid) contains 5,179 protein-coding and 98 RNA genes, including 91 tRNA ... See full document

... The genome is 3,771,216 bp long with 64,30% G+C content (Table 4, Figure 6). It is composed of 73 contigs (54 contigs are >1,500 bp) arranged into 6 scaffolds. Of the 3,812 predicted genes, 3,761 were ... See full document

... The runs were performed overnight and then ana- lyzed on the cluster through the gsRunBrowser and gsAssembler_Roche. The global 176,029 passed filter sequences generated 56.24 Mb with a length average of 319 bp. These ... See full document

... Here, we compared the genome of B. jeddahensis strain JCE T with those of “Bacillus massiliosenegalensis” strain JC6 T , “Bacillus massilioanorexius” strain AP8 T , “Bacillus timonensis” strain MM10403188, ... See full document

... Defining bacterial species is a matter of debate. This is notably due to the elevated cost and poor reproducibility and inter-laboratory comparability of the “gold standard” DNA-DNA hybridization and G+C content ... See full document

... The genome is 4,632,049 bp long (1 chromosome, but no plasmid) with a 37.30% GC content (Figure 5 and Table 3). Of the 4,684 predicted genes, 4,610 were protein-coding genes and 74 were RNAs. A total of 3,399 ... See full document