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An efficient Gibbs sampler for structural inference 75

Adapting the Gibbs sampler

Adapting the Gibbs sampler

... computationally efficient optimisation criteria for the Metropolis algorithm accep- tance rate (and, equivalently, proposal scale), we develop criteria for optimising the selection probabilities of the Random Scan ...

158

A fast and efficient Gibbs sampler for BayesB in whole-genome analyses.

A fast and efficient Gibbs sampler for BayesB in whole-genome analyses.

... Real genotypic data and simulated phenotypic data were used here to compare BayesB using MH, efficient MH or the three different Gibbs samplers as described above. The genotypic data included 3961 ...

8

"Efficient Gibbs Sampler for Bayesian Analysis of a Sample Selection Model"

"Efficient Gibbs Sampler for Bayesian Analysis of a Sample Selection Model"

... We consider Bayesian estimation of a sample selection model and propose a highly efficient Gibbs sampler using the additional scale transformation step to speed up the convergence to the posterior ...

16

A Gibbs Sampler for Learning DAGs

A Gibbs Sampler for Learning DAGs

... a Gibbs sampler for structure learning of DAGs that amelio- rates key deficiencies in existing ...The Gibbs sampler proposed here con- siders the parents of a set of nodes as a single ...

39

Convergence Rates for a  Hierarchical Gibbs Sampler

Convergence Rates for a Hierarchical Gibbs Sampler

... particular Gibbs sampler to its equi- librium distribution. This sampler is for a Bayesian inference model for a gamma random variable, whose only complexity lies in its multiple levels of ...

23

Structural Model Updating and Health Monitoring with Incomplete Modal Data Using Gibbs Sampler

Structural Model Updating and Health Monitoring with Incomplete Modal Data Using Gibbs Sampler

... linear structural models. It is based on the Gibbs sampler, a stochastic simulation method that decomposes the uncertain model parameters into three groups, so that the direct sampling from any one ...

16

Analysis of the Gibbs Sampler for hierarchical inverse problems

Analysis of the Gibbs Sampler for hierarchical inverse problems

... the inference problem; that is, we endow it with a prior P( δ ); this leads to a hierarchical Bayesian ...the inference problem ; see also [11, 10], where conditionally Gaussian hierarchical models have ...

35

A Gibbs Sampler for Phrasal Synchronous Grammar Induction

A Gibbs Sampler for Phrasal Synchronous Grammar Induction

... Cherry and Lin, 2007; Zhang et al., 2008b; Blun- som et al., 2008). However this asymptotic time complexity is of high enough order (O(|f| 3 |e| 3 )) that inference is impractical for real translation data. ...

9

Analysis of the Gibbs Sampler for Hierarchical Inverse Problems

Analysis of the Gibbs Sampler for Hierarchical Inverse Problems

... the inference problem, that is, we endow it with a prior P(δ); this leads to a hierarchical Bayesian ...the inference problem; see also [11, 10] where conditionally Gaussian hierarchical models have been ...

32

Efficient Estimation and Inference in Cointegrating Regressions with Structural Change

Efficient Estimation and Inference in Cointegrating Regressions with Structural Change

... and structural change by using previously explained ...of structural change, we can estimate the model efficiently by the canonical cointegrating regression (CCR) method by Park (1992) and the fully ...

33

A Partially Collapsed Gibbs Sampler with Accelerated Convergence for EEG Source Localization

A Partially Collapsed Gibbs Sampler with Accelerated Convergence for EEG Source Localization

... Bayesian models and methods have become standard statis- tical tools to solve inference problems associated with many signal and image processing applications (e.g., see [1]). Un- fortunately, it is often not ...

6

Sparse Bayesian binary logistic regression using the split-and-augmented Gibbs sampler

Sparse Bayesian binary logistic regression using the split-and-augmented Gibbs sampler

... of efficient simulation-based methods is still an active research area because of the analytically challenging form of the binomial ...split-and-augmented Gibbs sampler ...

7

Sparse Bayesian binary logistic regression using the split-and-augmented Gibbs sampler

Sparse Bayesian binary logistic regression using the split-and-augmented Gibbs sampler

... of efficient simulation-based methods is still an active research area because of the analytically challenging form of the binomial ...split-and-augmented Gibbs sampler ...

8

Hybrid variational / gibbs collapsed inference in topic models

Hybrid variational / gibbs collapsed inference in topic models

... Bayesian inference and (collapsed) Gibbs sampling are the two important classes of inference algorithms for Bayesian ...collapsed Gibbs sampling is unbiased but is also inefficient for large ...

9

Bayesian inference and Gibbs sampling in generalized true random effects model

Bayesian inference and Gibbs sampling in generalized true random effects model

... [Table 6 here; r* sensitivity analysis] Simulation experiments show that the results do not change significantly for fairly reasonable values of 𝑟 𝑢 ∗ and 𝑟 𝜂 ∗ that oscillate within 0.5-0.9 interval. Once 𝑟 𝑢 ∗ and 𝑟 𝜂 ...

22

Online but Accurate Inference for Latent Variable Models with Local Gibbs Sampling

Online but Accurate Inference for Latent Variable Models with Local Gibbs Sampling

... although efficient implementations have been developed, for example for LDA (Zhao et ...variational inference builds an approximate model for the posterior distribu- tion over latent variables—called ...

46

Particle Gibbs Split-Merge Sampling for Bayesian Inference in Mixture Models

Particle Gibbs Split-Merge Sampling for Bayesian Inference in Mixture Models

... any efficient proposal needs to be informed by the observations corresponding to the indices in ...restricted Gibbs scans are performed to reallocate the remaining points originally clustered with the ...

39

Online but Accurate Inference for Latent Variable Models with Local Gibbs Sampling

Online but Accurate Inference for Latent Variable Models with Local Gibbs Sampling

... online inference scheme to handle intractable conditional distributions of latent variables, with a proper use of local Gibbs sampling within online EM, that leads to significant improvements over ...

45

Bayesian inference and Gibbs sampling in generalized true random-effects model

Bayesian inference and Gibbs sampling in generalized true random-effects model

... constructed Gibbs sampler based on (4-12) we generate datasets similar to the ones in Tsionas and Kumbhakar (2014: ...“naive” Gibbs sampler for model in (2) is the prior on the ...“naive” ...

22

P- and T-Wave Delineation in ECG Signals Using a Bayesian Approach and a Partially Collapsed Gibbs Sampler

P- and T-Wave Delineation in ECG Signals Using a Bayesian Approach and a Partially Collapsed Gibbs Sampler

... Bayesian inference to represent a priori relationships among ECG wave ...lapsed Gibbs sampler principle, the wave delineation and estima- tion are conducted simultaneously by using a Bayesian ...

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