Markov chains Monte Carlo
Statistical Methods in Phylogenetic and Evolutionary Inferences
... a Markov Chains Monte Carlo (MCMC) Metropolis algorithm in the evaluation of a random sample of trees from the their posterior distribution in order to find the best candidate ...
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Multilevel Monte Carlo for continuous time Markov chains, with applications in biochemical kinetics
... multi-level Monte Carlo approach to the continuous time Markov chain setting, thereby greatly lowering the computational complexity needed to compute expected values of functions of the state of the ...
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Parallel hierarchical sampling : a general purpose class of multiple chains MCMC algorithms
... of Markov chain Monte Carlo algorithms using several interact- ing chains having the same target distribution but different mixing ...PHS chains, which we call the “mother” chain, ...
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Uncovering mental representations with Markov chain Monte Carlo
... As in the previous experiment, it took approximately 20 trials for the chains to converge, so only the remaining 60 trials per chain were analyzed. The acceptance rates in the four conditions ranged from 38% to ...
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Markov chain Monte Carlo analysis of cholera epidemic
... The autocorrelation functions measure how well the MCMC sampler performs by measuring the autocorrelation between parameters θ i and θ i+q at lag q. The smaller the autocorrelation values, the better mixing of the ...
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On Markov chain Monte Carlo methods for tall data
... There are few results available on how the properties of combined estimators scale with the number of batches B. Neiswanger et al. (2014) fit a kernel density estimator to the samples of each batchwise chain, and ...
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Non-linear Markov Chain Monte Carlo
... non-linear Markov Chain Monte Carlo (MCMC) methods for simulating from a probability measure ...Non-linear Markov kernels ...Self-Interacting Markov Chains (Del Moral & Miclo ...
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Stability of sequential Markov Chain Monte Carlo methods
... time-homogeneous Markov processes (see ...of Markov Chain Monte Carlo (MCMC) methods based on reversible Markov chains (see ...ergodic Markov chain having µ as invariant ...
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Markov chain Monte Carlo on the GPU
... chain Monte Carlo refers to the concept of using Markov chains for random sam- pling of our state space as a tool for approximating the number of states that we ...
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Speculative moves : multithreading Markov Chain Monte Carlo programs
... multiple chains can be run on multiple computers, each using a different initial model but keeping all other factors the ...the chains can be simply grouped [7], not only reducing the time to obtain a fixed ...
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Bayesian Inference for PCFGs via Markov Chain Monte Carlo
... The standard methods for inferring the parameters of probabilistic models in computational linguistics are based on the principle of maximum-likelihood esti- mation; for example, the parameters of Probabilistic ...
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Monte Carlo methods
... distribution. Monte Carlo methods are sampling algorithms that allow to com- pute these integrals numerically when they are not analytically ...common Monte Carlo algorithms, among which ...
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Particle Filters and Data Assimilation
... State-space models can be used to incorporate subject knowledge on the underlying dynamics of a time series by the introduction of a latent Markov state-process. A user can specify the dynamics of this process ...
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Designing An Efficient Real Time Summon Acuity System For Physically Drained Human
... Hidden Markov Model (HMM) is presented for gesture trajectory modeling and ...data. Markov Chain Monte Carlo (MCMC) plays a positive role in Bayesian statistical ...
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Piecewise deterministic Markov processes for continuous time Monte Carlo
... sions of sequential Monte Carlo and MCMC algo- rithms. These algorithms are fundamentally different from more standard discrete-time versions. Currently, only a few specific algorithms, from a much wider ...
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On the containment condition for adaptive Markov Chain Monte Carlo algorithms
... adaptive Markov chain Monte Carlo (MCMC) algorithms for multidimensional target distributions, in particular Adaptive Metropo- lis and Adaptive ...
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Piecewise Deterministic Markov Processes for Continuous Time Monte Carlo
... continuous-time Monte Carlo algorithm, show how it relates to a piecewise deterministic Markov process, and how we can use the theory for these processes to see that the Monte Carlo ...
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Markov Chain Monte Carlo to Study the Estimation of the Coefficient of Variation
... apply Markov Chain Monte Carlo (MCMC) techniques to tackle this problem, which allows us to construct the credible ...Finally, Monte Carlo simulations are performed to observe the ...
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Multilevel and quasi Monte Carlo methods for uncertainty quantification in particle travel times through random heterogeneous porous media
... In this paper, we investigate three existing methods for outperforming MC, namely, multilevel Monte Carlo (MLMC) [3], quasi-Monte Carlo (QMC) [4] and multilevel quasi-Monte Carlo ...
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Parallel Markov Chain Monte Carlo
... This introductory chapter describes the layout of this thesis, its primary contribu- tions, and introduces the terminology that will be used throughout the document. Chapter 2 presents the background research relevant to ...
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