Simple Sequence Repeat
Simple sequence repeat markers that identify Claviceps species and strains
... develop simple sequence repeat (SSRs) markers for rapid identification of ...from sequence data stored at the National Center for Biotechnology Information ...are simple to use, ...
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Genetic and phenotypic association of the carnauba palm tree evaluated by inter-simple sequence repeat and biometric traits
... ABSTRACT. The carnauba palm Copernicia prunifera is the third most important non-timber forest species in Brazil; it is mainly known for the production of carnauba wax. We examined intra- population genetic diversity and ...
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Confirmation of Pearl Millet Napiergrass Hybrids Using EST Derived Simple Sequence Repeat (SSR) Markers
... Prospects for deploying perennial grasses that are currently considered leading candidates for dedicated energy crops over large acreages are debatable because of several limitations, including vegetative propagation or ...
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Fingerprinting and genetic diversity evaluation of rice cultivars using Inter Simple Sequence Repeat marker
... Rice as one of the most important agricultural crops has a putative potential for ensuring food security and addressing poverty in the world. In the present study, in order to provide basic information to improve rice ...
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ISOLATION AND OPTIMIZATION OF INTER-SIMPLE SEQUENCE REPEAT (ISSR) TECHNIQUE FOR PLEUROTUS SAJOR CAJU TOWARDS ENVIROMENTAL STUDY IN SUPPORT OF THE COUNTRY’S NUCLEAR POWER PROGRAMME
... Inter-Simple Sequence Repeat (ISSR) and primers screening on Pleurotus sajor caju mushroom strains from Nuclear Malaysia’s Sterifeed Mushrooms Collection ...
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A Simple Sequence Repeat-Based Linkage Map of Barley
... new simple sequence repeat (SSR)-based markers for barley have been developed from a combination of database sequences and small insert genomic libraries enriched for a range of short simple ...
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Analysis of the genetic diversity of Lonicera japonica Thumb. using inter-simple sequence repeat markers.
... inter-simple sequence repeat (ISSR) (Zietkiewicz et ...inexpensive, simple, and efficient DNA marker method that does not require prior knowledge of the DNA sequence or large amounts of ...
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The application of high resolution melting in the analysis of simple sequence repeat and single nucleotide polymorphism markers in a pea (Pisum sativum L ) population
... of simple sequence repeat (SSR) markers (parental and population samples): (a) – PSMPSAA72, (b) – PSMPSAA153, (c) – SMPSAA170, (d) – PSMPSAD61, (e) – PSMPSAD135, (f) – PSMPSAB30, (g) – PSMPSAB47, (h) ...
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Genetic profiling of sugarcane genotypes using Inter Simple Sequence Repeat (ISSR) markers
... or simple sequence repeat (SSR) marker amplified tandemely di, tri and tetra nucleotide repeats that are widely distributed on ...(inter simple sequence repeat) analysis which ...
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Genetic Diversity Analysis of Maize Hybrids Through Morphological Traits and Simple Sequence Repeat Markers
... 20 simple sequence repeat (SSR) loci were used to study the morphological and genetic diversity among 20 maize hybrids selected from different countries, and to classify the hybrids into groups based ...
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Assessment of Genetic Diversity in Contrasting Sugarcane Varieties Using Inter Simple Sequence Repeat (ISSR) Markers
... Assessment of Genetic Diversity in Contrasting Sugarcane Varieties Using Inter-Simple Sequence Repeat ISSR Markers Assessed by RAPD Analysis,” Genetic Resources and Crop Evolution, Vol..[r] ...
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Optimization of sequence alignment for simple sequence repeat regions
... Sequence alignment involves the identification of the correct location of INDELS that have happened since their divergence from a common precursor. The true alignment reflects the evolutionary relationships ...
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Characterization and compilation of polymorphic simple sequence repeat (SSR) markers of peanut from public database
... Information on publicly available peanut SSRs was col- lected by scanning scientific publications. Based on se- quence similarity search with legacy Arachis SSR primer sequences, redundant primer sequences were detected ...
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Assessing Probability of Ancestry Using Simple Sequence Repeat Profiles: Applications to Maize Hybrids and Inbreds
... Elder, J. K., and E. M. Southern, 1987 Computer-aided analysis White, E., J. Hunter, C. Dubetz, R. Brost, A. Bratton et al., 2000 of one dimensional restriction fragment gels, pp. 165–172 in Microsatellite markers for ...
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Finding and extending ancient simple sequence repeat-derived regions in the human genome
... biased sequence near SSR loci and clustered similar loci (see ...SSR sequence degeneracy over time pos- sible; long dead SSR loci resemble the derived and most de- generate portions of active SSR loci that ...
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Simple sequence repeat variation in the Daphnia pulex genome
... dissect repeat length heterozygosity, focusing on potential differences in heterozygosity among specific motif ...dimer repeat motifs (Figure 4a and ...increased repeat heterozygosity with increasing ...
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Length polymorphisms of simple sequence repeat DNA in soybean.
... ancestral cultivars that include genotypes that form the germplasm base of cultivars grown in the southern United States, (4) southern U.S. cultivars that include soybeans de[r] ...
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Assessment of Genetic Relatedness of Clams (Egeria radiata) Using Inter Simple Sequence Repeat (ISSR) Markers
... The current research employed ISSR marker to assess the genetic relatedness of freshwater clams ( Egeria radiata ) from different populations.. MATERIALS AND METHODS.[r] ...
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Random amplified polymorphic dna and inter simple sequence repeat fingerprints for assessing genetic diversity of Indian garlic
... Analysis of the RAPD data using Nei’s original measures of genetic identity and genetic distance showed that the genetic similarity GS value ranged from 1.0 to 0.74 with a mean value of [r] ...
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Identification of Linked Markers for Delayed Fruit Ripening in Tomato Using Simple Sequence Repeat (SSR) Markers
... Molecular analysis of tomato has advantage of having relatively small genome size and simple diploid genetics with wide variety of molecular markers (0.9 pg/haploid genome; Arumuganathan and Earle, 1991) thousands ...
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