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[PDF] Top 20 Multilocus Sequence Typing System for Group B Streptococcus

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Multilocus Sequence Typing System for Group B Streptococcus

Multilocus Sequence Typing System for Group B Streptococcus

... scheme has insufficient discriminatory power and groups iso- lates that are not closely related in genotype. However, a sim- ilar variation in the serotype of isolates within a single geno- type was also shown by ... See full document

7

Multilocus Sequence Typing of Candida
glabrata Reveals Geographically Enriched
Clades

Multilocus Sequence Typing of Candida glabrata Reveals Geographically Enriched Clades

... 42), multilocus enzyme electrophoresis (MLEE) (5), and fingerprinting with complex DNA probes ...direct sequence comparison for typing ...fingerprinting system based on direct sequence ... See full document

9

Multilocus Sequence Typing of Methicillin Resistant Staphylococcus aureus from an Area of Low Endemicity by Real Time PCR

Multilocus Sequence Typing of Methicillin Resistant Staphylococcus aureus from an Area of Low Endemicity by Real Time PCR

... LightCycler System PCR for MLST offers the advantage to perform efficient and rapid amplification, and real-time detec- tion of the seven housekeeping genes in the same PCR ...closed system to eliminate ... See full document

7

Multilocus Sequence Typing of Mycobacterium xenopi

Multilocus Sequence Typing of Mycobacterium xenopi

... ITS B/C) and assign ITS profiles to all but nine ...ST-9 group shared the same ITS A/A ...26, B/B ⫽ 4, B/C ⫽ 9), ST-5 was subdivided into three clusters (B/B ⫽ 1, ... See full document

5

Multilocus Sequence Typing of Clostridium difficile

Multilocus Sequence Typing of Clostridium difficile

... PCR ribotyping. All PCR ribotyping of reference isolates and cultured isolates described in the present study was performed at the reference labo- ratory for the C. difficile Ribotyping Network for England and Northern ... See full document

9

Analysis of a Uropathogenic Escherichia coli Clonal Group by Multilocus Sequence Typing

Analysis of a Uropathogenic Escherichia coli Clonal Group by Multilocus Sequence Typing

... comparison and, therefore, does not suffer from the drawbacks of gel-based fingerprinting methods. Sequence data are easily comparable and transferable between laboratories and are highly reproducible (2, 12). ... See full document

5

Multilocus Sequence Typing Scheme That Provides Both Species and Strain Differentiation for the Burkholderia cepacia Complex

Multilocus Sequence Typing Scheme That Provides Both Species and Strain Differentiation for the Burkholderia cepacia Complex

... single multilocus sequence typing (MLST) scheme was developed for precise characterization of the opportunistic pathogens of Burkholderia cepacia complex (BCC), a group composed of at least ... See full document

9

Multilocus Sequence Typing for Characterization of Staphylococcus pseudintermedius

Multilocus Sequence Typing for Characterization of Staphylococcus pseudintermedius

... It is of interest that ST71, the most commonly identified MRSP clone spreading worldwide to date, could not be further distin- guished using the new MLST-7 scheme. Although only 11 isolates were included in this study, ... See full document

5

Molecular Epidemiology of Streptococcus uberis Clinical Mastitis in Dairy Herds: Strain Heterogeneity and Transmission

Molecular Epidemiology of Streptococcus uberis Clinical Mastitis in Dairy Herds: Strain Heterogeneity and Transmission

... Multilocus sequence typing was successfully completed on 494 isolates of Streptococcus uberis from clinical mastitis cases in a study of 52 commercial dairy herds over a 12-month ...195 ... See full document

7

Identity and prevalence of multilocus sequence typing-defined clones of group A streptococci within a hospital setting

Identity and prevalence of multilocus sequence typing-defined clones of group A streptococci within a hospital setting

... of group A streptococci (GAS) were collected from a London hospital and characterized by multilocus sequence typing (MLST) to determine the identity and prevalence of clones circulating within ... See full document

5

Multilocus sequence typing breathes life into a microbial metagenome

Multilocus sequence typing breathes life into a microbial metagenome

... nucleotide sequence-based genetic typing method, multilocus sequence typing, we were able for the first time to match clonal cultivable isolates to a published and controversial ... See full document

9

Multiplex Strategy for Multilocus Sequence Typing, fla Typing, and Genetic Determination of Antimicrobial Resistance of Campylobacter jejuni and Campylobacter coli Isolates Collected in Switzerland

Multiplex Strategy for Multilocus Sequence Typing, fla Typing, and Genetic Determination of Antimicrobial Resistance of Campylobacter jejuni and Campylobacter coli Isolates Collected in Switzerland

... The analyzed strain set represented a highly variable group of isolates, which is certainly based on the absence of epide- miological relationship of samples. Nonetheless, this study pro- vides for the first time ... See full document

12

Multilocus Sequence Typing Scheme for Enterococcus faecium

Multilocus Sequence Typing Scheme for Enterococcus faecium

... approximately equal numbers of isolates and both comprised VREF and VSEF isolates. The significance of the observed bifuractions is strongly supported by bootstrap analysis. The average numbers of nucleotide differences ... See full document

10

Multilocus sequence typing (MLST), porA and flaA typing of Campylobacter jejuni isolated from cats attending a veterinary clinic

Multilocus sequence typing (MLST), porA and flaA typing of Campylobacter jejuni isolated from cats attending a veterinary clinic

... selected multilocus sequence typing (MLST) ...into sequence types (ST) which in turn can be grouped into clonal complexes (CC) ...with typing of flaA and porA sequences ... See full document

6

Comparing Pulsed Field Gel Electrophoresis with Multilocus Sequence Typing, spa Typing, Staphylococcal Cassette Chromosome mec (SCCmec) Typing, and PCR for Panton Valentine Leukocidin, arcA, and opp3 in Methicillin Resistant Staphylococcus aureus Isolates

Comparing Pulsed Field Gel Electrophoresis with Multilocus Sequence Typing, spa Typing, Staphylococcal Cassette Chromosome mec (SCCmec) Typing, and PCR for Panton Valentine Leukocidin, arcA, and opp3 in Methicillin Resistant Staphylococcus aureus Isolates at a U S Medical Center

... Each MRSA isolate underwent characterization by PFGE, using SmaI as a restriction endonuclease, at the Minnesota Department of Health (3). Patterns were compared by using Dice coefficients, and those that were within 80% ... See full document

6

Multilocus Sequence Typing of Pathogenic Candida Species

Multilocus Sequence Typing of Pathogenic Candida Species

... Strain typing facilitates tracing of sources and routes of transmission of infection ...for typing is designed to reveal differences between strain types and is usually assessed statistically for its ... See full document

10

The microbial ecology of Campylobacter jejuni in New Zealand within a spatial temporal framework : a thesis presented in partial fulfilment of requirements for the degree of Doctor of Philosophy in Veterinary Science at Massey University, Manawatu, New Ze

The microbial ecology of Campylobacter jejuni in New Zealand within a spatial temporal framework : a thesis presented in partial fulfilment of requirements for the degree of Doctor of Philosophy in Veterinary Science at Massey University, Manawatu, New Zealand

... The multilocus sequence typing system uses an allelic profile based on loci that are part of the core genome and this has been used for source attribution [99] ...generalist group and ... See full document

258

Development of a Multilocus Sequence Typing System for Medically Relevant Bipolaris Species

Development of a Multilocus Sequence Typing System for Medically Relevant Bipolaris Species

... DNA sequence and the Basic Local Alignment Search Tool (BLAST) on the CBS fungal database website ...concatenated multilocus sequences of all Bipolaris isolates were pool aligned using MUSCLE (or otherwise ... See full document

8

Development of a Multilocus Sequence Typing Scheme for Molecular Typing of Mycoplasma pneumoniae

Development of a Multilocus Sequence Typing Scheme for Molecular Typing of Mycoplasma pneumoniae

... molecular typing of ...molecular typing targeted the gene en- coding the major surface protein (P1) of ...molecular typing and have resulted in the identi- fication of an additional subtype and three ... See full document

9

Multilocus Sequence Typing of Streptococcus pneumoniae by Use of Mass Spectrometry

Multilocus Sequence Typing of Streptococcus pneumoniae by Use of Mass Spectrometry

... novel sequence types not previously listed in the MLST ...same sequence type displayed different serotypes (8 and 9L), evidence of capsular ...novel sequence types and seven new alleles were ... See full document

6

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