[PDF] Top 20 Multilocus Sequence Typing System forCampylobacter jejuni
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Multilocus Sequence Typing System forCampylobacter jejuni
... Choice of loci. A number of candidate loci, encoding enzymes responsible for intermediary metabolism, were identified by searching the C. jejuni genome database (http:www.sanger.ac.uk/Projects/C_jejuni/) (26) with ... See full document
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Multilocus Sequence Typing of Clostridium difficile
... PCR ribotyping. All PCR ribotyping of reference isolates and cultured isolates described in the present study was performed at the reference labo- ratory for the C. difficile Ribotyping Network for England and Northern ... See full document
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Utility of Multilocus Sequence Typing as an Epidemiological Tool for Investigation of Outbreaks of Gastroenteritis Caused by Campylobacter jejuni
... C. jejuni. Phenotypic methods include serotyping (32), phage typing (36), and biotyping ...C. jejuni, including ribo- typing (10), flaA restriction fragment length polymorphism typ- ing (25), ... See full document
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Multilocus Sequence Typing of Candida glabrata Reveals Geographically Enriched Clades
... MLST is considered a highly effective method for DNA fingerprinting microorganisms, since it fulfills the requirement set forth by some population geneticists that a method must be based on the identification of discrete ... See full document
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Clonal Complexes of Campylobacter jejuni Identified by Multilocus Sequence Typing Correlate with Strain Associations Identified by Multilocus Enzyme Electrophoresis
... Campylobacter jejuni is the most common bacterial cause of gastroenteritis in the United States; the number of cases of gastroenteritis attributed to ...C. jejuni has been estimated to exceed 4 million per ... See full document
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Development of a Multilocus Sequence Typing System for Medically Relevant Bipolaris Species
... from 10 different hospitals in three states (Texas, Arkansas, and Florida) during 2008-2013. Three compelling epidemiological features emerged during the investigation: (i) all patients had a recent history of ... See full document
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Multilocus Sequence Typing System for Group B Streptococcus
... used multilocus enzyme electro- phoresis to study the population structure of ...of multilocus enzyme electrophoresis was more diverse and con- tained several subdivisions and numerous electrophoretic types ... See full document
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Typing of Campylobacter jejuni Isolates from Dogs by Use of Multilocus Sequence Typing and Pulsed Field Gel Electrophoresis
... the sequence type most commonly iso- lated from water and suggested that it might be better adapted to survive outside a host and thus is crucial in the transmission of ...C. jejuni throughout the ... See full document
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Multilocus Sequence Typing of Campylobacter jejuni Isolates from Humans, Chickens, Raw Milk, and Environmental Water in Quebec, Canada
... The water isolates were obtained from river and tributary water samples collected in the Eastern Townships between 13 May and 12 August 2003 (23). In brief, each sample represented about 500 ml of water collected in a ... See full document
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Multilocus Sequence Typing of the Pathogenic Fungus Aspergillus fumigatus
... The total number of polymorphic sites from all seven MLST fragments in our system was 41 (Table 3); therefore, 1.35% of the 3,038 nucleotides from seven MLST fragments have poly- morphisms. This “SNP return” is ... See full document
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Multilocus Sequence Typing for Differentiation of Strains of Candida tropicalis
... Similarity of isolates from the same source. A neighbor- joining dendrogram for all 30 duplicate and multiple isolates from single sources is shown in Fig. 1. Twelve isolates from three different patients coclustered ... See full document
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Optimization and Validation of Multilocus Sequence Typing for Candida albicans
... strain typing have been developed for this species (32), but no system has yet achieved universal ...sequences. Typing based on the intergenic transcribed spacer sequences of genes encoding rRNA tend ... See full document
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Multilocus sequence typing as a replacement for serotyping in salmonella enterica
... phoresis) [17,18] through to MLVA (MultiLocus Variable number of tandem repeats Analysis) [19,20]. These methods are possibly useful for recognizing a common source of microorganisms from a single outbreak [21], ... See full document
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Multilocus Sequence Typing of Corynebacterium ulcerans Provides Evidence for Zoonotic Transmission and for Increased Prevalence of Certain Sequence Types among Toxigenic Strains
... a multilocus sequence typing (MLST) system (4), which enables fast and economical epidemiologic studies and out- break analysis of ...is sequence/allele based, and therefore, the ... See full document
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Molecular Typing of Selected Enterococcus faecalis Isolates: Pilot Study Using Multilocus Sequence Typing and Pulsed Field Gel Electrophoresis
... Campylobacter jejuni (7, 9, 11, 12, ...DNA sequence-based typing methods have been suggested as offering advantage over other techniques because (i) the data are objective and readily comparable ... See full document
9
Typing of Campylobacter jejuni isolates from Dogs using Multilocus Sequence Typing and Pulsed Field Gel Electrophoresis
... C. jejuni isolates obtained from dogs from various populations using MLST in order to (i) determine whether strains of ...C. jejuni carried by dogs appear to be different to those found in humans and other ... See full document
20
Francisella tularensis Strain Typing Using Multiple Locus, Variable Number Tandem Repeat Analysis
... genomic sequence for potential variable-number tandem repeats (VNTRs), we developed a multilocus VNTR analysis (MLVA) typing system for this ...classification system of ... See full document
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Multilocus Sequence Typing of Methicillin Resistant Staphylococcus aureus from an Area of Low Endemicity by Real Time PCR
... LightCycler System PCR offers an efficient and rapid amplification of seven housekeeping genes in the same PCR run and real-time detection of the products without gel ...SCCmec typing results when ... See full document
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Multilocus Sequence Typing of Pathogenic Candida Species
... Strain typing facilitates tracing of sources and routes of transmission of infection ...for typing is designed to reveal differences between strain types and is usually assessed statistically for its ... See full document
10
Multilocus Sequence Typing for Characterization of Staphylococcus pseudintermedius
... In this study, we report the development of a 7-locus MLST scheme for S. pseudintermedius. We propose that the data generated by this method can be globally shared to obtain a clearer picture of the spread of methicillin ... See full document
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