[PDF] Top 20 Multilocus Variable Number Tandem Repeat Typing of Mycobacterium ulcerans
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Multilocus Variable Number Tandem Repeat Typing of Mycobacterium ulcerans
... M. ulcerans in Africa and lend support to the hypothesis of a recent distribution of the organism across this continent ...M. ulcerans genotypes in South ...M. ulcerans strains originating from a ... See full document
6
Multilocus Variable Number Tandem Repeat Analysis for Investigation of Clostridium difficile Transmission in Hospitals
... REA typing (Table ...one tandem repeat at different loci (Tables 1 and 3, patient ...one tandem repeat at a ...MLVA typing correlated with the REA-typing data for all 10 ... See full document
9
Clustering of Tuberculosis Cases Based on Variable Number Tandem Repeat Typing in Relation to the Population Structure of Mycobacterium tuberculosis in the Netherlands
... 13. Supply P, Allix C, Lesjean S, Cardoso-Oelemann M, Rüsch-Gerdes S, Willery E, Savine E, de Haas P, van Deutekom H, Roring S, Bifani P, Kurepina N, Kreiswirth B, Sola C, Rastogi N, Vatin V, Gutierrez MC, Fauville M, ... See full document
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Development of Variable Number Tandem Repeat Typing of Mycobacterium bovis: Comparison of Results with Those Obtained by Using Existing Exact Tandem Repeats and Spoligotyping
... the Mycobacterium tuberculosis complex (MTBC) in molecular epidemiological studies, mainly through identifying restriction fragment length poly- morphisms ...RFLP typing has practical processing and ... See full document
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Proposal for Standardization of Optimized Mycobacterial Interspersed Repetitive Unit Variable Number Tandem Repeat Typing of Mycobacterium tuberculosis
... MIRU-VNTR typing based on 12 loci in combination with spoligotyping has been adopted as a robust basis for large-scale real-time typing of M. tuberculosis isolates in the United States, after validation in ... See full document
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Mycobacterial Interspersed Repetitive Unit Typing of Mycobacterium tuberculosis Compared to IS6110 Based Restriction Fragment Length Polymorphism Analysis for Investigation of Apparently Clustered Cases of Tuberculosis
... the number of copies of tandem repeat sequences is an invaluable tool for the genotyping of higher ...limited number of these structures (five in total) were described by Frothingham and ... See full document
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Multilocus Variable Number Tandem Repeat Analysis and Multilocus Sequence Typing Reveal Genetic Relationships among Clostridium difficile Isolates Genotyped by Restriction Endonuclease Analysis
... In this study, MLST genetic lineages that were single-locus variants of one another defined a clonal complex in the MST analysis. There were 17 C. difficile genetic lineages defined by MLST, and a large clonal complex ... See full document
7
Evaluation of a Multilocus Variable Number Tandem Repeat Analysis Scheme for Typing Human Brucella Isolates in a Region of Brucellosis Endemicity
... Minisatellite repeat numbers (panel 1 [loci bruce06, bruce08, bruce11, bruce12, bruce42, bruce43, bruce45, and bruce55]) and mic- rosatellite repeat numbers (panel 2A [loci bruce18, bruce19, and bruce21] ... See full document
6
Serogroup C meningococci in Italy in the era of conjugate menC vaccination
... sequence typing), porA VRs (Variable Region) typing, PFGE (Pulsed Field Gel Electrophoresis), VNTR (Variable Number Tandem Repeats) analyses were performed on all C:2a and C:2b ... See full document
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First Worldwide Proficiency Study on Variable Number Tandem Repeat Typing of Mycobacterium tuberculosis Complex Strains
... VNTR typing method is the lower level of accuracy of allele sizing on gels, especially for larger PCR ...largest repeat unit size (111 bp [26]) and therefore gener- ating some of the largest allele sizes ... See full document
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Use of Mycobacterial Interspersed Repetitive Unit Variable Number Tandem Repeat Typing To Examine Genetic Diversity of Mycobacterium tuberculosis in Singapore
... strain typing of M. tuberculosis based on variable-number tandem repeats (VNTRs) of mycobacterial interspersed repetitive units (MIRU) has recently been intro- duced (18, ...A number of ... See full document
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Evaluation of New Variable Number Tandem Repeat Systems for Typing Mycobacterium tuberculosis with Beijing Genotype Isolates from Beijing, China
... the typing of M. tuberculosis strains, especially strains with high IS6110 copy numbers. In the present study, all 72 M. tubercu- losis isolates showed high-IS6110-copy-number (10 to 23) fin- gerprints. ... See full document
5
Utility of New 24 Locus Variable Number Tandem Repeat Typing for Discriminating Mycobacterium tuberculosis Clinical Isolates Collected in Bulgaria
... molecular typing of Mycobacterium tuberculosis with a collection of strains circulating in ...primary typing tool; it subdivided these strains into 37 types, including 15 clusters and 22 ...(RFLP) ... See full document
7
Multilocus Variable Number Tandem Repeat Analysis of Clostridioides difficile Clusters in Ribotype 027 Isolates and Lack of Association with Clinical Outcomes
... discriminant typing techniques, such as multilocus variable- number tandem-repeat analysis (MLVA), have been used to identify the transmission dynamics of ...The number of ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of Neisseria meningitidis Yields Groupings Similar to Those Obtained by Multilocus Sequence Typing
... molecular typing and is already used by many research groups worldwide for epidemiological stud- ies, and a large public MLST database is readily available over the ... See full document
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Rapid Variable Number Tandem Repeat Genotyping for Mycobacterium leprae Clinical Specimens
... Discovery of new VNTRs. In our earlier study (6), 44 loci suitable for VNTR strain typing were listed. VNTRs were discovered at seven microsatellite loci containing 1-, 2-, and 3-bp repeat units in a panel ... See full document
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Multilocus Variable Number Tandem Repeat Analysis Scheme for Chlamydia felis Genotyping: Comparison with Multilocus Sequence Typing
... proposed typing system for all chlamydial ...of tandem repeats at multiple loci on the chromosome of bacteria, whereas MLST is based on the se- quence analysis of housekeeping ... See full document
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Multilocus Variable Number Tandem Repeat Method for Typing Salmonella enterica Serovar Newport
... The MLVA protocol for S. Newport presented here dem- onstrated excellent repeatability and close congruence with PFGE and multilocus sequence typing, as well as having strong correspondence with ... See full document
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Application of Multilocus Variable Number Tandem Repeat Analysis for Molecular Typing of the Agent of Leptospirosis
... molecular typing systems based on variable-number tandem-repeat (VNTR) analysis have been described and have been used to identify Leptospira interrogans ...extend multilocus ... See full document
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Selection and Validation of a Multilocus Variable Number Tandem Repeat Analysis Panel for Typing Shigella spp
... the multilocus sequence typing (MLST) approach, greatly improved the current knowledge of the origin and phylogenetic evolution of Shigella ...genomospecies. Multilocus variable-number ... See full document
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