[PDF] Top 20 Sequence and structural elements that contribute to efficient encephalomyocarditis virus RNA translation.
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Sequence and structural elements that contribute to efficient encephalomyocarditis virus RNA translation.
... Cap-independent translation of encephalomyocarditis virus RNA: structural elements of the internal ribosomal entry site and involvement of a cellular 57-kD RNA-binding protein.. Initiati[r] ... See full document
8
Structural and phenotypic analysis of Chikungunya virus RNA replication elements
... long RNA element – deletion of which does not inhibit virus RNA replication ...two RNA replication elements (SL102 and SL85), both of which are involved in efficient genome ... See full document
17
Secondary Structural Elements within the 3′ Untranslated Region of Mouse Hepatitis Virus Strain JHM Genomic RNA
... Conserved structural elements within the 3⬘ UTR of MHV and BCoV genomic RNA participate in DI RNA ...DI RNA replication assays demon- strated that this 7-bp structure was required for ... See full document
9
Structural and Functional Analysis of the cis-Acting Elements Required for Plus-Strand RNA Synthesis of Bamboo Mosaic Virus
... plus-strand RNA synthesis efficiency (Fig. 4) and of viral RNA accumulation ...promoter sequence require a particular amount of space to fulfill the specificity in initiating the viral plus-strand ... See full document
8
Human Ago2 Is Required for Efficient MicroRNA 122 Regulation of Hepatitis C Virus RNA Accumulation and Translation
... small RNA duplexes, such as siRNA and microRNA, and medi- ate translational ...characteristic structural elements called PAZ and PIWI domains ...HCV translation following Ago2 knockdown ... See full document
9
Role of the Hepatitis C Virus Core+1 Open Reading Frame and Core cis-Acting RNA Elements in Viral RNA Translation and Replication
... on sequence alterations in the core region encompassing RNA elements SL47 and SL87 (44, 48, ...for RNA stability but play important roles in RNA ...these RNA elements may ... See full document
13
Characterization of the Sequence Element Directing Translation Reinitiation in RNA of the Calicivirus Rabbit Hemorrhagic Disease Virus
... viral RNA and for positioning these ribo- somes properly at the translational start ...18S RNA, whereas the task of motif 2 would be to position the ribosome in the right way by a still-undefined mechanism ... See full document
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Translation of the Flavivirus Kunjin NS3 Gene in cis but Not Its RNA Sequence or Secondary Structure Is Essential for Efficient RNA Packaging
... Kunjin virus (KUN) full-length cDNA clones harboring in-frame deletions in the NS3 gene demonstrated the inability of these defective complemented RNAs to be packaged into virus particles ...in RNA ... See full document
10
The sequence element of the internal ribosome entry site and a 25-kilodalton cellular protein contribute to efficient internal initiation of translation of hepatitis C virus RNA.
... C virus (HCV) RNA is initiated by internal entry of ribosomes into the 5 * noncoding region ...genomic elements within the 5 * NCR called the internal ribosome entry site (IRES) and may involve host ... See full document
5
Sequence and Structural Elements at the 3′ Terminus of Bovine Viral Diarrhea Virus Genomic RNA: Functional Role during RNA Replication
... DI9c RNA. The numbers above the nucleotide sequence represent the coordinates utilized throughout this work to describe the structure-probing ...the RNA transcripts used in this study. RNA ... See full document
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The sequence context of the initiation codon in the encephalomyocarditis virus leader modulates efficiency of internal translation initiation.
... The efficiency of use of EMCV AUG-11 as well as the occurrence of initiation at downstream AUGs was assessed by transient expression in COS-1 monkey cells transfected with the various co[r] ... See full document
9
RNA Replication from the Simian Virus 5 Antigenomic Promoter Requires Three Sequence-Dependent Elements Separated by Sequence-Independent Spacer Regions
... simian virus 5 (SV5) that a functional promoter for RNA replication requires proper spacing between two discontinuous elements: a 19-base segment at the 3 ⴕ terminus (conserved region I [CRI]) and an ... See full document
6
Structural Determinant of Human La Protein Critical for Internal Initiation of Translation of Hepatitis C Virus RNA
... IRES-mediated translation in ...monocistronic RNA was translated in RRL in the absence or presence of increasing concentrations (15, 30, and 60 M) of either the wt LaR2C-N7 or the mutant mLaR2C-N7-4 ... See full document
12
In vitro translation of avian myeloblastosis virus RNA.
... Based upon two-dimensional peptide mapping, the 56,000- and 48,000-dalton proteins did not appear to be related to Pr769'9, the MAV-1 env gene products, or the proteins produced by trans[r] ... See full document
11
Adenovirus virus-associated RNA and translation control.
... Translational control by adenovirus: lack of virus-associated RNA, during adenovirus infection results in phosphorylation of initiation factor eIF-2 and inhibition of protein synthesis..[r] ... See full document
6
Protein-RNA interaction in encephalomyocarditis virus as revealed by UV light-induced covalent linkages.
... Tracks: 1, UV-irradiated virus banding at 1.46 g/cm3 in CsCl; 2, UV-irradiated and heated virus banding at 1.40 g/cm3; 3, heated virus banding at 1.30 g/cm3; 4, RNA-linked proteins of UV[r] ... See full document
8
Insertion sequence elements-mediated structural variations in bacterial genomes
... Insertion sequence (IS) elements are the smallest but a common class of MGEs in bacterial ...DNA sequence variation in bacterial genome evolution and mutagenicity [12, ...genome structural ... See full document
5
Structural Constraints on RNA Virus Evolution
... of sequence diver- gence in the timing of virus ...of RNA viruses originated very recently, our inability to measure long-term rates of sequence change or to understand the restrictions on ... See full document
8
Translation but not the encoded sequence is essential for the efficient propagation of the defective interfering RNAs of the coronavirus mouse hepatitis virus.
... require translation of a large ORF for efficient propagation ...that translation of a full-length ORF is not required: DISP6 accumulates to levels similar to those of DISP3, indi- cating that ... See full document
8
Efficient system of homologous RNA recombination in brome mosaic virus: sequence and structure requirements and accuracy of crossovers.
... region. Sequence analysis of 239 indepen- dently generated homologous recombinants ...positive-sense RNA involved a U residue (90% of cases compared with the expected 25% if misincorporation was random) ... See full document
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