Clonal complexes of the six sequence types (STs)
Clonal Complexes of Campylobacter jejuni Identified by Multilocus Sequence Typing Are Reliably Predicted by Restriction Fragment Length Polymorphism Analyses of the flaA Gene
... Multilocus sequence typing (MLST) has provided important new insights into the population structure of Campylobacter jejuni and is rapidly becoming the gold standard for typing this ...predicts clonal ...
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Multilocus Sequence Typing Analysis of Staphylococcus lugdunensis Implies a Clonal Population Structure
... multilocus sequence typing (MLST) scheme was developed to study the genetic rela- tionships and population structure of 87 ...DNA sequence analysis of seven housekeeping genes (aroE, dat, ddl, gmk, ldh, ...
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Clonal Complexes of Campylobacter jejuni Identified by Multilocus Sequence Typing Correlate with Strain Associations Identified by Multilocus Enzyme Electrophoresis
... Similarly, clonal complex ST-460 contained isolates with two STs (ST-460 and ST-461) that differed at the gln locus, with a single nucleotide difference between the gln-30 and gln-65 ...ST-353 clonal ...
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Clonal Nature of Campylobacter fetus as Defined by Multilocus Sequence Typing
... multilocus sequence typing (MLST) scheme for ...different sequence types (STs) were identified, and these exhibited low levels of inter-ST genetic diversity, with only 22 variable sites in 3,312 ...
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Streptococcus mutans Clonal Variation Revealed by Multilocus Sequence Typing
... Between 14 and 23 alleles per locus were identified, allowing us theoretically to distinguish more than 1.2 ⴛ 10 10 sequence types. We identified 92 sequence types in these 102 isolates, ...
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Clonal Analysis of Staphylococcus epidermidis Isolates Carrying or Lacking Biofilm Mediating Genes by Multilocus Sequence Typing
... this sequence type was also detected in a Norwegian hospital and in medical facilities in the United ...SCCmec types identified in the STs of both ...
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fimA Genotypes and Multilocus Sequence Types of Porphyromonas gingivalis from Patients with Periodontitis
... The relationship between the distribution of fimA genotypes and MLST data for P. gingivalis has not been investigated before. The tendency of the fimA genotypes in relation to the multilocus STs to cluster with isolates ...
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Methicillin Resistant Staphylococcus aureus Clonal Types in the Czech Republic
... Staphylococcus aureus clone in Hungarian hospitals. Clin. Microbiol. Infect. 3:289–296. 9. de Lencastre, H., E. P. Severina, R. B. Roberts, B. N. Kreiswirth, A. Tomasz, and BARG Initiative Pilot Study Group. 1996. ...
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Analysis of a Uropathogenic Escherichia coli Clonal Group by Multilocus Sequence Typing
... The evaluation of new molecular strain typing techniques with well-characterized isolates and previously established typing methods is an important component of infectious disease epide- miologic research. Although the ...
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Update on the Major Clonal Types of Methicillin Resistant Staphylococcus aureus in the Czech Republic
... each clonal type were analyzed by multilocus sequence typing and by a multiplex PCR method capable of identifying the structural type of the staphylococcal cassette chromosome mec (SCCmec) carried by the ...
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Evidence for absence in northern Europe of especially virulent clonal types of Actinobacillus actinomycetemcomitans
... 530-bp sequence has been associated with significantly increased toxin pro- duction detected among isolates from patients with juvenile periodontitis in North America but was detected neither among the 88 isolates ...
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Sequence dependent attack on peptides by photoactivated platinum anticancer complexes
... Results and discussion K 3 -Bom and SubP are naturally occurring peptides with a role in some types of cancer; K 3 -Bom is a known tumour marker, 36 and SubP has elevated levels in several types of cancer ...
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Locally confined clonal complexes of Mycobacterium ulcerans in two Buruli ulcer endemic regions of Cameroon
... comparative genomic analysis of strains from two geographically separated BU endemic areas of Cameroon, the Mapé and the Nyong river basins, identified two phylogenetically distinct lineages of M. ulcerans. These data ...
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Particular Distribution of Enterobacter cloacae Strains Isolated from Urinary Tract Infection within Clonal Complexes
... ABSTRACT Background: Based on biochemical properties, Enterobacter cloacae represents a large complex of at least 13 variant species, subspecies, and genotypes that progressively identified as the most species causing ...
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SNP/RD Typing of Mycobacterium tuberculosis Beijing Strains Reveals Local and Worldwide Disseminated Clonal Complexes.
... to six strains from Indonesia that were already present in the collection, total Indonesian strains n = 17) and 55 additional Beijing strains from South Africa (in addition to ten South African strains that were ...
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An Evaluation of Phylogenetic Methods for Reconstructing Transmitted HIV Variants using Longitudinal Clonal HIV Sequence Data
... virus sequence, the only possible types of recombination events are within, as opposed to between, diver- gent lineages ...ancestral sequence at the root should be markedly less affected than if ...
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Different Types of nsP3-Containing Protein Complexes in Sindbis Virus-Infected Cells
... the sequence specificity of RNA binding is very ...ribonucleoprotein complexes, and has recently been reported to bind to the dengue virus 3 ⬘ untranslated region and to have an antiviral effect ...
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Most Multidrug Resistant Pseudomonas aeruginosa Isolates from Hospitals in Eastern France Belong to a Few Clonal Types
... multilocus sequence typing to analyze 187 strains isolated in different French ...few clonal types (ST235, ST111, and ST175) that are already spreading ...
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Four and Six Coordinate Complexes of Divalent Nickel
... Key words: Four and six coordinate complexes, divalent nickel. formed, after refluxation for three hours was allowed to settle. The precipitate was washed with water, ethanol and ether and finally dried in ...
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Identification of genomic clonal types of Actinobacillus actinomycetemcomitans by restriction endonuclease analysis
... (Fig. lb) manifested two more distinct DNA fragment pat- terns. lb, lane 1) was designated Sall type VII. lb, lanes 2 to 4) produced identical DNA fragment patterns with Sall and were de[r] ...
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