Temporal gene expression patterns compared to adults
Temporal patterns of gene expression in the antenna of the adult Drosophila melanogaster.
... In fact, random events, such as the accumulation of molecular damage due to reactive oxygen species, is one of the presently favored mechanisms used to support the rate-of-livin[r] ...
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Spatial and temporal patterns of gene expression during neurogenesis in the sea urchin Lytechinus variegatus
... and temporal gene expression data are ...detailed gene regula- tory network for neurogenesis in the sea urchin that can be compared across metazoans to resolve questions about how ...
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Data Integration for Spatio-Temporal Patterns of Gene Expression of Zebrafish development: the GEMS database
... our patterns annotation with the species-specific annotation sets provided by GOA and to use a Distributed Annotation System (DAS) [35] server to enable a straightforward integration of GEMS gene ...
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CiteSeerX — Clustering Gene Expression Patterns
... the temporal nature of this data, the authors added for each gene the di erence between the values at each two consecutive time points as an extra data point between them, thereby transforming each ...
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The temporal and spatial analysis of single cell gene expression
... 6.2.3 Summary Statistics The final part of our exploratory analysis is to estimate those summary statistics given in Section 5.3. Some care needs to be taken when performing this analysis as we have previously identified ...
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Temporal Activation Profiles of Gene Sets for the Analysis of Gene Expression Time Series
... The gene expression time series study conducted to analyze the molecular genetic process involved during wound healing is divided into two separate analyses in this ...The expression data from three ...
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Protein structure protection commits gene expression patterns
... Background: Gene co-expressions often determine module-defining spatial and temporal concurrences of ...for expression correlations to the three-dimensional structures of gene ...
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Global analysis of patterns of gene expression during Drosophilaembryogenesis
... a gene set can be further subdivided by manual curation, using our primary image ...of gene expression pat- terns. Clustering provides gene groupings based on spatio- temporal ...
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Two Medfly Promoters That Have Originated by Recent Gene Duplication Drive Distinct Sex, Tissue and Temporal Expression Patterns
... two gene promoters show distinct expression patterns of the reporter gene, consistent with previously reported evidence for analogous transcriptional activity of the corresponding endogenous ...
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Optic nerve crush induces spatial and temporal gene expression patterns in retina and optic nerve of BALB/cJ mice
... detrimental gene expression changes occur that contribute to trauma-induced neurodegeneration after injury to ON ...plasticity gene), Synpr and Syt1 (synaptic vesicle fusion genes), and Vsnl1 (neuron ...
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Relating perturbation magnitude to temporal gene expression in biological systems
... 3D). The area of relative displacement increased in response to increased stress. For the aggregate of selected genes (Fig. 4A), the area of relative displacement associated with the 0.7 M stress was approximately 2.4 ...
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A temporal switch model for estimating transcriptional activity in gene expression
... correlated gene ex- pression patterns will also have correlated promoter structure and regulation ...circadian gene subset, identified using APPLES (Baxter et ...
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Temporal and spatial expression patterns of FoxN genes in Xenopus laevis embryos
... FoxN4 forw: 5´-ccg ctc gag cgg AAT GAT AGA CAG TGA CAT CTC TGC-3´ rev: 5´-gcc tat gta ATA CAT AGA GAA GTC ATC ACA GT-3´. 5´-RACE was performed using GeneRacer Kit, Invitrogen. PCR was done with T3 or T7 primers and a ...
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Patterns of expansion and expression divergence in the plant polygalacturonase gene family
... with gene expression to provide a framework to unravel the complexity of gene family ...the temporal and spatial patterns of expression in other tissues, their bio- chemical ...
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Dissecting the Heterogeneity of Skin Gene Expression Patterns in Systemic Sclerosis
... Figure 4. Hierarchical clustering of patients with systemic sclerosis based on cell type signature scores. Each row represents a patient sample. Transcript scores for each patient were calculated with respect to 14 cell ...
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Gene expression patterns in human prostate stem cell differentiation
... CPA4 expression to a greater extent than TSA in the most basal and non-malignant cell lines (PNT2-C2 and P4E6), whereas TSA had a larger effect on the more differentiated and malignant cell lines (PC3 and ...CPA4 ...
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A Rhamnose-Inducible System for Precise and Temporal Control of Gene Expression in Cyanobacteria
... rhaBAD expression system variants, as subtle di ff erences had been observed between cells containing di ff erent constructs in di ff erent culturing ...directly compared between di ff erent days and ...
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A temporal precedence based clustering method for gene expression microarray data
... intermediate gene interactions due to physical or chemical ...of temporal microarray data based on the notion of temporal inter- action between the ...The temporal recording of gene ...
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Heart morphogenesis gene regulatory networks revealed by temporal expression analysis
... to groups of genes containing a large number gene regulatory interactions. Although it is not currently possible to measure the level of conservation between the GRNs in zebrafish and mammalian heart development, ...
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Disparate oxidant gene expression of airway epithelium compared to alveolar macrophages in smokers
... the gene expression patterns of oxidant-related genes in the small airway epithelium and alveolar macrophages of the same individuals and how do these different cell pop- ulations respond to the ...
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