[PDF] Top 20 Development of Multiple Locus Variable Number Tandem Repeat Analysis for Molecular Typing of Mycoplasma pneumoniae
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Development of Multiple Locus Variable Number Tandem Repeat Analysis for Molecular Typing of Mycoplasma pneumoniae
... a typing system to be considered more or less ideal ...available typing meth- ods. In comparison, the HGDI of the P1 PCR-RFLP typing method for the 265 isolates was only ...each locus, with ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of Neisseria meningitidis Yields Groupings Similar to Those Obtained by Multilocus Sequence Typing
... the number of ...highly variable repeat numbers, making these loci unsuitable for population ...the analysis of outbreaks, whereas MLST cannot dis- criminate ...a number of ST-11 ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of Salmonella enterica Serovar Typhi
... Multilocus variable-number tandem repeats (VNTRs) are widely used as molecular markers to differ- entiate isolates of homogenous pathogenic ...VNTR analysis (MLVA) profiles were found, ... See full document
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Variable Number of Tandem Repeats in Salmonella enterica subsp enterica for Typing Purposes
... sequence typing (MLST) (21) and its recent introduction for the characterization of Salmo- nella strains (15) has opened the way to standardization of data handling and the development of web-based ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis, a Novel Typing Scheme To Study the Genetic Relatedness and Epidemiology of Enterococcus faecium Isolates
... Stability of tandem repeats in outbreaks and in vitro. To analyze the stability of MLVA profiles, MLVA profiles of isolates recovered during two related outbreaks in the years 2000 to 2003 were determined. The ... See full document
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Development of a Multiple Locus Variable Number Tandem Repeat Typing Scheme for Genetic Fingerprinting of Burkholderia cenocepacia and Application to Nationwide Epidemiological Analysis
... able typing method, which is increasingly used to trace bacterial ...the typing of ...the repeat unit varied from 15 to 75 bp, which allows for allele assignment by means of simple agarose gel ... See full document
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Application of Multilocus Variable Number Tandem Repeat Analysis for Molecular Typing of the Agent of Leptospirosis
... copy number of repeats (data not ...using Tandem Repeats Finder software ...criteria: repeat size, 15 to 140 bp; number of repeats, 2 to 12; sequence homology between repeats, ⬎ ...further ... See full document
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Identification of Variable Number Tandem Repeat (VNTR) Sequences in Legionella pneumophila and Development of an Optimized Multiple Locus VNTR Analysis Typing Scheme
... EUL isolates. For the three reference strains, the amplicon size estimates by all three centers were consistent with the predicted length of individual VNTRs, as inferred from ge- nome analysis (compare data in ... See full document
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Improved Multiple Locus Variable Number Tandem Repeat Assay for Staphylococcus aureus Genotyping, Providing a Highly Informative Technique Together with Strong Phylogenetic Value
... improved multiple-locus variable-number tandem-repeat (VNTR) analysis (MLVA) scheme for genotyping Staphylococcus ...sequence typing (MLST) and spa typing in ... See full document
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Genotypic characterization of gentamicin and cephalosporin resistant Escherichia coli isolates from blood cultures in a Norwegian university hospital 2011–2015
... of molecular typing methods is essential in both surveillance and outbreak investigations as well as in tracking of evolutionary trends of microbes in both the community and healthcare ...standard” ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis as a Tool for Subtyping Listeria monocytogenes Strains
... Listeria monocytogenes, the causative agent of listeriosis, is a dangerous food-borne pathogen. Listeriosis causes meningitis, encephalitis, and septicemia, primarily in the elderly or in immunocompromised patients. It ... See full document
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Comparison of Two Multiple Locus Variable Number Tandem Repeat Analysis Methods for Molecular Strain Typing of Human Brucella melitensis Isolates from the Middle East
... 2008. Multiple locus variable number tandem repeat (VNTR) analysis (MLVA) of Brucella ...multilocus variable-number tandem-repeat ... See full document
6
Molecular typing of Salmonella enterica serovar Enteritidis isolates from food-producing animals in Japan by multilocus variable-number tandem repeat analysis: evidence of clonal dissemination and replacement
... of multiple-locus variable-number tandem repeat analysis, pulsed-field gel electrophoresis, and phage typing for subtype analysis of Salmonella enterica ... See full document
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Evaluating the impacts of stressors of Pseudomonas syringae pathovar tomato on the effectiveness of multi-locus variable number tandem repeat analysis and multi-locus sequence typing in microbial forensic investigations
... v1.1/3.1; Applied Biosystems Carlsbad, CA, USA), 2 μl 10 mM individual primer (Table 3), 2 μl Ready Reac- tion Mix (BigDye v3.1; Applied Biosystems), and 2 μl of cleaned PCR product from each sample. Cycling conditions ... See full document
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Comparison of Multiple Locus Variable Number Tandem Repeat Analysis with Pulsed Field Gel Electrophoresis Typing of Acinetobacter baumannii in China
... four isolates were found to group together by both PFGE and MLVA-7 (Fig. 1 and 3) and so were categorized as outbreak-asso- ciated strains. The remaining 5 isolates, with distinct PFGE pro- files, were categorized as ... See full document
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Novel Multiple Locus Variable Number Tandem Repeat Analysis Method for Rapid Molecular Typing of Human Staphylococcus aureus
... MLVA typing was performed by using SIRU01, -05, -07, -13, -15, -16, and -21 (representing the spa gene) and sspA (5, ...The number of repeat units (RUs) in each locus was determined by ... See full document
5
Development and validation of a multiple locus variable number tandem repeat analysis (MLVA) scheme for Fusobacterium necrophorum
... environment where the pathogen lives, and often multiplies (Krämer et al., 2010). F. necrophorum is considered to be an opportunistic pa- thogen (Langworth, 1977; Tan et al., 1996), consequently healthy in- dividuals ... See full document
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Francisella tularensis Strain Typing Using Multiple Locus, Variable Number Tandem Repeat Analysis
... The tularemia cases represented by the California isolates group into two separate clusters (I and II), suggesting the presence of a very subdivided reservoir of F. tularensis biovars in this region. Temporal overlap is ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis for Typing of Staphylococcus epidermidis
... Congruent typing results indicate robust measurements of genetic ...PFGE typing with MLVA argues that the genomic targets of MLVA and PFGE share evolutionary histories although MLVA and PFGE typing ... See full document
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Multiple Locus Variable Number Tandem Repeat Assay Analysis of Methicillin Resistant Staphylococcus aureus Strains
... a multiple-locus variable-number tandem-repeat assay (MLVA) for Staphylococcus aureus could predict pulsed-field gel electrophoresis (PFGE) types ... See full document
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