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Background correction and between array normalization

A stepwise framework for the normalization of array CGH data

A stepwise framework for the normalization of array CGH data

... CGH array images, while maintaining the true biological ...two array CGH platforms, SMRT (Sub Mega base Resolution Tiling) BAC arrays and cDNA arrays of Pollack et ...stepwise normalization framework ...

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Normalization of Human Y Chromosome SNP-Array Data

Normalization of Human Y Chromosome SNP-Array Data

... differences between them, the median of these values would represent ...relation between MAPD and SD is 𝑀𝐴𝑃𝐷/0,96 = 𝑆𝐷 when Log2 values are distributed ...

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Selection of correction candidates for the normalization of Spanish user generated content

Selection of correction candidates for the normalization of Spanish user generated content

... 1.2.3 Correction candidate selection N-gram models have been used for the detection 2 and correction 3 of misspellings in isolated words since the late 1980’s (Kukich, ...word correction Mays et ...a ...

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Normalization of qPCR array data: a novel method based on procrustes superimposition

Normalization of qPCR array data: a novel method based on procrustes superimposition

... difference between true and obtained ...better normalization. Although quantile normalization led to the least biased data, the lowering caused increased variance up to the point that MSE is ...

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Information Theoretic Measures for Clusterings Comparison: Variants, Properties, Normalization and Correction for Chance

Information Theoretic Measures for Clusterings Comparison: Variants, Properties, Normalization and Correction for Chance

... the normalization and the metric properties. Between the two, the NID is preferable since the tighter upper bound of the MI used for normalization allows it to better use the [0,1] ...

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Evaluation of normalization procedures for oligonucleotide array data based on spiked cRNA controls

Evaluation of normalization procedures for oligonucleotide array data based on spiked cRNA controls

... difference between fitting ten 11-point responses versus a single 121-point ...that array will be skewed, and the F-metric readout for that array will be skewed relative to the other nine ...skewed ...

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SWAN: Subset quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips

SWAN: Subset quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips

... analysis between two groups, as reducing technical variation whilst maintaining biolo- gical differences should increase the power to detect truly differentially methylated ...

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An attitude error correction method based on MARG sensor array

An attitude error correction method based on MARG sensor array

... Picard angle increment method is used to obtain the quaternion for the track generator. The calculated attitude angle is the same as the ground truth. Fig. 2 shows a comparison between the calculated attitude ...

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A Linear Antenna Array Failure Correction Using Firefly Algorithm

A Linear Antenna Array Failure Correction Using Firefly Algorithm

... antenna array failure has been addressed using Firefly Algorithm (FA) by controlling only the amplitude excitation of array ...error between pre-failed (original) sidelobe pattern and measured ...

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Does varicocele correction lead to normalization of preoperatively elevated mean platelet volume levels?

Does varicocele correction lead to normalization of preoperatively elevated mean platelet volume levels?

... relationship between MPV and vascular diseases, only a few investigate the rela� tionship between MPV and ...relationship between preoperative and 6�month postoperative MPV values in patients whose ...

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Functional normalization of 450k methylation array data improves replication in large cancer studies

Functional normalization of 450k methylation array data improves replication in large cancer studies

... DMPs between the eight ...common between the two platforms and ask: ‘What is the degree of agreement between the top k DMPs iden- tified using the two different platforms?’ Figure 4a shows that ...

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A background correction method to compensate illumination variation in hyperspectral imaging.

A background correction method to compensate illumination variation in hyperspectral imaging.

... of the corrected spectrum could be up to 29.6% lower than the GT, but importantly, the shapes of the spectral profiles of the calculated reflectance and absorbance remained unaffected. Therefore, prior information about ...

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Background fluorescence reduction and absorption correction for fluorescence reflectance imaging

Background fluorescence reduction and absorption correction for fluorescence reflectance imaging

... a correction technique based on this illumination ...relationship between the excitation intensity profile and the background fluorescence ...

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Investigations into Background Correction and Retention Time Alignment to Enhance Quantitative Chemometric Analysis of Comprehensive Two-Dimensional Liquid Chromatography-Diode Array Detection Data

Investigations into Background Correction and Retention Time Alignment to Enhance Quantitative Chemometric Analysis of Comprehensive Two-Dimensional Liquid Chromatography-Diode Array Detection Data

... shift correction followed by PARAFAC to analyze GCxGC-TOFMS chromatograms of a single peak of ...shift correction relied on iteratively moving the chromatogram and then calculating the correlation ...shift ...

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Stray light correction for diode-array-based spectrometers using a monochromator

Stray light correction for diode-array-based spectrometers using a monochromator

... Monochromator-Based Correction Unlike spectrally tunable lasers, monochromators are widely available at relatively low cost and are easy to ...tionship between these factors; for example, output levels can ...

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A NOVEL ILLUMINATION CORRECTION AND INTENSITY NORMALIZATION METHOD ON CERVIGRAMS IN THE EARLY DETECTION OF UTERINE CERVICAL CANCER

A NOVEL ILLUMINATION CORRECTION AND INTENSITY NORMALIZATION METHOD ON CERVIGRAMS IN THE EARLY DETECTION OF UTERINE CERVICAL CANCER

... aged between 30 years to 60 years old, 18 are affected by cervical ...illumination correction methods and intensity normalization methods are ...

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A Distribution-Free Convolution Model for Background Correction of Oligonucleotide Microarray Data

A Distribution-Free Convolution Model for Background Correction of Oligonucleotide Microarray Data

... GCRMA uses the probe sequence information given by MM probes and it works well for the HG-U95Av2 data, but not for the HG-U133A data. The performance discrep- ancy may be explained in part by the improved technol- ogy ...

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A Linear Antenna Array Failure Correction with Null Steering using Firefly Algorithm

A Linear Antenna Array Failure Correction with Null Steering using Firefly Algorithm

... forming array antenna systems used in defence equipment increases the side lobe power level which distorts the beam pattern of the antenna ...of array failure correction becomes more complex when ...

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Measurement of the Polarization of the Cosmic Microwave Background with the BICEP2 and Keck Array Telescopes

Measurement of the Polarization of the Cosmic Microwave Background with the BICEP2 and Keck Array Telescopes

... Bicep2/Keck Array, which are derivative of the Bicep1 instrument [85], is contrary to the usual design of most science quality telescopes in operation today, which boast very large mirrors and very fine angular ...

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USZEGED: Correction Type sensitive Normalization of English Tweets Using Efficiently Indexed n gram Statistics

USZEGED: Correction Type sensitive Normalization of English Tweets Using Efficiently Indexed n gram Statistics

... • a → er located at the end of words (e.g. in bigga → bigger). By making the above relaxations to the def- inition of the standard edit distance, we could obtain larger candidate sets for a given edit dis- tance ...

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