Cdna Microarray
The cellular response to heat stress in the goby Gillichthys mirabilis: a cDNA microarray and protein level analysis
... A cDNA microarray consisting of 9207 features was used to generate transcriptomic profiles from individuals exposed to elevated temperature for up to ...
18
Identification of Schistosoma mansonigender associated gene transcripts by cDNA microarray profiling
... of cDNA microarrays to study gene expression in schistosomes, we investigated the reproducible nature of this functional genomics ...each cDNA microarray hybridization experiment was obtained by ...
12
Different cDNA microarray patterns of gene expression reflecting changes during metastatic progression in adenoid cystic carcinoma
... throughput cDNA microar- ray ...developed cDNA microarray technology that allows the simultaneous analysis of the expression levels of thousands of genes ...
7
Carbon tetrachloride affects inflammation-related biochemical networks in the mouse liver as identified by a customized cDNA microarray system
... upgraded cDNA microarray, the mouse Liver Stress Array ...our microarray system, we selected genes whose expressions are reported to be affected by known toxicants, namely, responsive-genes of the ...
10
A New Method to Grid Noisy cDNA Microarray Images Utilizing Denoising Techniques
... of microarray images, a new, automatic, fast and accurate approach is proposed for gridding noisy cDNA microarray ...world, microarray image doesn’t reflect measures of the fluorescence ...
9
A DETAILED ANALYSIS OF VARIOUS DENOISING TECHNIQUES FOR CDNA MICROARRAY IMAGES
... The salt and pepper noise is also called as impulse noise or spike noise. A typical variety of salt and pepper noise in a cDNA microarray image is the salt and pepper noise which will have dark pixel in ...
19
Linkage between Mitochondrial Hypovirulence and Viral Hypovirulence in the Chestnut Blight Fungus Revealed by cDNA Microarray Analysis
... parasitica cDNA microarray plat- form provides the means of examining whether the common responses to CHV1-EP713 infection and mitochondrial hypo- virulence extend to other viruses that are associated with ...
6
Generation of EST and cDNA Microarray Resources for the Study of Bovine Immunobiology*
... of cDNA microarray experi- ments, since one can easily move from a list of clone names to a tentative identification of the transcript represented by each ...of cDNA microarrays with amplicons from a ...
15
Development of a cDNA microarray for the measurement of gene expression in the sheep scab mite Psoroptes ovis
... for 10 mins, samples were then aspirated with mixing and transferred to a 384-well cleanup plate (Genetix, UK). Successful PCR product amplification was assessed by the presence of a single product band through gel ...
10
Automating the processing of cDNA microarray images
... of cDNA microarray ...segment cDNA microarray images and performs postprocessing to eliminate the segmentation ...for cDNA microarray image compression is introduced and a coding ...
63
Sources of nonlinearity in cDNA microarray expression measurements
... To assess response linearity on glass slides, we designed two dilution experiments. In the first, a set of serially diluted (factor of two) Cy3-labeled oligonucleotide samples ranging from 0.4-0.003 2 g/ 2 l was arrayed ...
7
Component retention in principal component analysis with application to cDNA microarray data
... This paper discusses an important problem in data analy- sis using PCA. The term 'component retention' that the authors use in the title is usually referred to as dimen- sional truncation or, in more general terms, as ...
21
Original Article Amplification of chromosome 8q21-qter associated with the acquired paclitaxel resistance of nasopharyngeal caricinoma cells
... by cDNA microarray in three taxol resis- tant sub-lines, and functionally clustered into various groups, including genes related to vascular formation vascular formation (ANGPT1), apoptosis (MYC, TOP1MT), ...
11
Gene expression profiles derived from fine needle aspiration correlate with response to systemic chemotherapy in breast cancer
... whether cDNA microarray profiles obtained from FNAs before chemotherapy would be able to differ- entiate and associate with the response or non-response to treatment, we studied an additional group of 10 ...
8
Expression levels of the hypothalamic AMPK gene determines the responsiveness of the rats to electroacupuncture induced analgesia
... using cDNA microarray identified that 5 ’ -AMP-activated protein kinase (AMPK), a well-known factor in the regulation of energy homeostasis, is the most highly expressed gene in the hypothalamus of the rats ...
7
Original Article The protection of acetylcholinesterase inhibitor on β-amyloid-induced injury of neurite outgrowth via regulating axon guidance related genes expression in neuronal cells
... Affymetrix cDNA microarray assay followed by real-time RT-PCR and Western Blotting analysis were used to elucidate and analyze the signaling pathway involved in Aβ and HupA’s ...between microarray ...
14
Original Article Up-regulation of ECT2 is associated with poor prognosis in gastric cancer patients
... Abstract: Objectives: The aim of this study was to investigate the expression of ECT2 in gastric cancer and its clini- cal significance. Methods and results: We investigated the differentially expressed genes between ...
8
An Immunogenomics Approach to Understanding Periparturient Immunosuppression and Mastitis Susceptibility in Dairy Cows*
... use cDNA microarray technology to explore bovine leukocyte RNA for global gene expression changes occurring around ...a cDNA microarray spotted with >700 cDNAs representing unique bovine ...
18
Escape from Transcriptional Shutoff during Poliovirus Infection: NF-κB-Responsive Genes IκBa and A20
... The host response to poliovirus infection has been previ- ously investigated using cDNA microarray analysis (19). This study revealed that the abundance of 12 mRNA species in- creased at 3 h after infection ...
10
Androgen responsive intronic non-coding RNAs
... custom-built cDNA microarray enriched in ESTs corre- sponding to fragments of intronic transcripts, we previ- ously detected transcription of a set of totally intronic ncRNAs, which are long ...
14