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Monte Carlo-Markov chain algorithm

II. DEVELOPING A NEW ALGORITHM

II. DEVELOPING A NEW ALGORITHM

... proposed algorithm GMI against MCMC MI (Markov Chain Monte Carlo Multiple Imputation), MCMC SI (Markov Chain Monte Carlo Single Imputation) and MS (Mean ...

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Bayesian System Identification of Nonlinear Dynamical Systems using a Fast MCMC Algorithm

Bayesian System Identification of Nonlinear Dynamical Systems using a Fast MCMC Algorithm

... of Markov chain Monte Carlo (MCMC) ...ergodic Markov chain whose stationary distri- bution is equal to P ( θ |D, M) such that, once the chain has converged, it can be used ...

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Likelihood and Bayes Estimation of Ancestral Population Sizes in Hominoids Using Data From Multiple Loci

Likelihood and Bayes Estimation of Ancestral Population Sizes in Hominoids Using Data From Multiple Loci

... Bayes algorithm using Markov chain Monte Carlo (MCMC) enjoys a computational advantage over ML and also provides a framework for incorporating prior information about the ...

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The iterated auxiliary particle filter

The iterated auxiliary particle filter

... We present an offline, iterated particle filter to facilitate statistical inference in general state space hidden Markov models. Given a model and a sequence of observa- tions, the associated marginal likelihood L ...

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Comparison of the Bayesian Methods on  Interval Censored Data for Weibull  Distribution

Comparison of the Bayesian Methods on Interval Censored Data for Weibull Distribution

... and Markov Chain Monte Carlo, where the Metropolis-Hastings algorithm used to estimate the scale and shape parameters, the mean squared errors (MSE) for each method were calculated ...

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DREAM(D): an adaptive Markov Chain Monte Carlo simulation algorithm to solve discrete, noncontinuous, and combinatorial posterior parameter estimation problems

DREAM(D): an adaptive Markov Chain Monte Carlo simulation algorithm to solve discrete, noncontinuous, and combinatorial posterior parameter estimation problems

... 2008). Monte Carlo meth- ods are admirably suited to generate samples from the pos- terior parameter distribution, but generally inefficient when confronted with complex, multimodal, and high-dimensional ...

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A Bayesian Network for Symptom diagnosis Data

A Bayesian Network for Symptom diagnosis Data

... a Markov chain-Monte Carlo based Metropolis-Hastings sampling method is applied to predict missing values for clinical data, and a K2 algorithm combined with BDE scoring function is ...

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Bayesian Mapping of Multiple Quantitative Trait Loci From Incomplete Outbred Offspring Data

Bayesian Mapping of Multiple Quantitative Trait Loci From Incomplete Outbred Offspring Data

... families or backcrosses. The amount of genotyping of parents and grandparents is optional, as well as the assumption that the QTL alleles in the crossed lines are fixed. Grandparental origin indicators are used, but ...

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Localisation of an Unknown Number of Land Mines Using a Network of Vapour Detectors

Localisation of an Unknown Number of Land Mines Using a Network of Vapour Detectors

... perform Markov chain Monte Carlo (MCMC) sampling ...a Markov chain where each sample depends on the previous one in the ...MCMC algorithm is the random walk Metropolis ...

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arxiv: v1 [physics.data-an] 6 Jan 2021

arxiv: v1 [physics.data-an] 6 Jan 2021

... (RWM) Markov chain Monte Carlo (MCMC) algorithm [see 10, for details about ...Hamiltonian Monte Carlo (HMC) technique [19, 4] and accounts for the net and background count ...

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Stochastic gradient Markov chain Monte Carlo

Stochastic gradient Markov chain Monte Carlo

... As discussed in Section 2.5 with regard to SGLD, re-parameterising the target distribution so that the components of θ are roughly uncorrelated and have similar marginal variances, can improve mixing. An extension of ...

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Hybrid Monte Carlo on Hilbert spaces

Hybrid Monte Carlo on Hilbert spaces

... Langevin algorithm and can consequently be far more efficient, in terms of asymptotic variance per unit of computational ...HMC Markov chain from Table 2 is roughly equivalent (in fact slightly less ...

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On Markov chain Monte Carlo methods for tall data

On Markov chain Monte Carlo methods for tall data

... Markov chain Monte Carlo methods are often deemed too computationally intensive to be of any practical use for big data applications, and in particular for inference on datasets containing a ...

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The Age of a Unique Event Polymorphism

The Age of a Unique Event Polymorphism

... a Markov chain Monte Carlo have also implemented a version of the algorithm that method for finding the conditional distribution of the allows both the mutation rates g and w to vary; ...

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Original Article Identification of B-cells participating in ifferentially- expressedp athways and hub genes in postmenopausal women with osteoporosis

Original Article Identification of B-cells participating in ifferentially- expressedp athways and hub genes in postmenopausal women with osteoporosis

... a Markov Chain Monte Carlo (MCMC) algorithm, can obtain a sequence of observations, approx- imated from a specified multivariate probabi- lity distribution ...

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Bayesian Mapping of Quantitative Trait Loci Under Complicated Mating Designs

Bayesian Mapping of Quantitative Trait Loci Under Complicated Mating Designs

... to plants where the pedigree sizes are usually large due Mixed model: Assume that the mapping population to the need to invert large IBD matrices repeatedly for consists of n individuals with arbitrary pedigree relation- ...

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Stability of sequential Markov Chain Monte Carlo methods

Stability of sequential Markov Chain Monte Carlo methods

... to keep track as precisely as possible of an evolving sequence (µ t ) 0≤t≤β of probability distributions. Here µ 0 is an initial distribution that is easy to simulate, and µ β is the target distribution that we would ...

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Bayesian Inference for PCFGs via Markov Chain Monte Carlo

Bayesian Inference for PCFGs via Markov Chain Monte Carlo

... two Markov chain Monte Carlo (MCMC) algorithms for Bayesian inference of probabilistic con- text free grammars (PCFGs) from ter- minal strings, providing an alternative to maximum-likelihood ...

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Bayesian Generalized Kernel Mixed Models

Bayesian Generalized Kernel Mixed Models

... a Markov chain Monte Carlo (MCMC) algorithm in which the reversible jump method is used for model selection and a Bayesian model averaging method is used for posterior ...

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On the containment condition for adaptive Markov Chain Monte Carlo algorithms

On the containment condition for adaptive Markov Chain Monte Carlo algorithms

... equivalent to the acceptance probability being uniformly bounded away from zero, and if the target density is lighter-than-exponentially tailed and satisfies Assumption 5.2, then any random-walk- based Metropolis ...

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