[PDF] Top 20 Comparison of Multiple Locus Variable Number Tandem Repeat Analysis with Pulsed Field Gel Electrophoresis Typing of Acinetobacter baumannii in China
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Comparison of Multiple Locus Variable Number Tandem Repeat Analysis with Pulsed Field Gel Electrophoresis Typing of Acinetobacter baumannii in China
... A. baumannii isolates to 11 anti- microbials: ampicillin, piperacillin-tazobactam, ceftriaxone, cef- tazidime-clavulanic acid, ciprofloxacin, rifampin, polymyxin B, doxycycline, chloramphenicol, imipenem, and ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis for Typing of Staphylococcus epidermidis
... rapid typing methods with high reproducibility. Since the 1990s, pulsed-field gel electrophoresis (PFGE) of whole-genome SmaI digests has been considered the “gold standard” for ... See full document
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Improved Identification of Epidemiologically Related Strains of Salmonella enterica by use of a Fusion Algorithm Based on Pulsed Field Gel Electrophoresis and Multiple Locus Variable Number Tandem Repeat Analysis
... Pulsed-field gel electrophoresis (PFGE) and multiple-locus variable-number tandem-repeat analysis (MLVA) are used to assess genetic similarity ... See full document
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Typing and Subtyping of Clostridium difficile Isolates by Using Multiple Locus Variable Number Tandem Repeat Analysis
... developed multiple-locus variable-number tandem-repeat analysis (MLVA) with automated fragment analysis and multicolored capillary electrophoresis as a ... See full document
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Novel Multiple Locus Variable Number Tandem Repeat Analysis Method for Rapid Molecular Typing of Human Staphylococcus aureus
... Pulsed-field gel electrophoresis (PFGE) is considered the gold standard method for the typing of Staphylococcus aureus isolates ...used typing schemes include multilocus sequence ... See full document
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Identification of Variable Number Tandem Repeat (VNTR) Sequences in Acinetobacter baumannii and Interlaboratory Validation of an Optimized Multiple Locus VNTR Analysis Typing Scheme
... Acinetobacter baumannii is an important opportunistic pathogen responsible for nosocomial outbreaks, mostly occurring in intensive care ...A. baumannii isolates. Multiple-locus ... See full document
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Optimized Multilocus Variable Number Tandem Repeat Analysis Assay and Its Complementarity with Pulsed Field Gel Electrophoresis and Multilocus Sequence Typing for Listeria monocytogenes Clone Identification and Surveillance
... sero- typing and molecular typing methods is used for surveillance, ep- idemiological tracking, and outbreak investigation purposes (6, ...containing multiple clonal groups of public health ... See full document
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Comparison of Two Multilocus Variable Number Tandem Repeat Methods and Pulsed Field Gel Electrophoresis for Differentiating Highly Clonal Methicillin Resistant Staphylococcus aureus Isolates
... the typing methods (the probability that similar clustering of isolates would be obtained with the different typing methods) for subtyping was low, with adjusted Rand indices values ranging from ...cases, ... See full document
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Comparison of Multiple Locus Variable Number Tandem Repeat Analysis, Pulsed Field Gel Electrophoresis, and Phage Typing for Subtype Analysis of Salmonella enterica Serotype Enteritidis
... each locus in our sample ...the typing method and the nature of the strains being ...phylogenetic analysis in isolates that are more geo- graphically dispersed ...interlaboratory comparison of ... See full document
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Comparison of Multiple Locus Variable Number Tandem Repeat Analysis with Pulsed Field Gel Electrophoresis, spa Typing, and Multilocus Sequence Typing for Clonal Characterization of Staphylococcus aureus Isolates
... increasing number of nosocomial and community-acquired ...precise typing of ...aureus typing has been recently dominated by molecular biology techniques based on variation analysis of DNA ... See full document
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Comparison between Salmonella enterica Serotype Enteritidis Genotyping Methods and Phage Type
... among typing results collected by applying multilocus vari- able-number tandem-repeat analysis (MLVA), pulsed-field gel electrophoresis (PFGE), and automated ... See full document
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Comparison of Fingerprinting Methods for Typing Methicillin Resistant Staphylococcus aureus Sequence Type 398
... the multiple-locus variable-number tandem-repeat assay (MLVA) and pulsed-field gel electrophoresis (PFGE) when using restriction enzymes BstZI, SacII, ... See full document
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Molecular Diagnostics in Clinical Microbiology
... by pulsed-field gel electrophoresis ...electric field across the gel is changed ...this gel, rather than the speed by which they can migrate in it ...for typing ... See full document
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Standardization and Interlaboratory Reproducibility Assessment of Pulsed Field Gel Electrophoresis Generated Fingerprints of Acinetobacter baumannii
... A. baumannii has emerged as an important nosocomial ...of Acinetobacter in the United States from ...increasing number of hospital outbreaks caused by A. baumannii has been reported from ... See full document
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Evaluating the impacts of stressors of Pseudomonas syringae pathovar tomato on the effectiveness of multi-locus variable number tandem repeat analysis and multi-locus sequence typing in microbial forensic investigations
... in repeat copy number between strains of a single microbial species ...copy number is often exploited for strain differentiation using MLVA ...MLVA typing involves PCR amplification of ... See full document
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Strain Typing of Borrelia burgdorferi, Borrelia afzelii, and Borrelia garinii by Using Multiple Locus Variable Number Tandem Repeat Analysis
... marker typing system. Multiple-locus VNTR analysis (MLVA) has previously shown great discriminatory capacity and accurate estimation of ge- netic relationships within bacterial pathogens such ... See full document
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Identification of Variable Number Tandem Repeat (VNTR) Sequences in Legionella pneumophila and Development of an Optimized Multiple Locus VNTR Analysis Typing Scheme
... nome analysis (compare data in Tables 3 and 4). Although the electrophoresis patterns appear to be similar, some discrepan- cies were initially observed between the three centers on the sizing which was ... See full document
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Development and validation of a multiple locus variable number tandem repeat analysis (MLVA) scheme for Fusobacterium necrophorum
... MLVA typing scheme was developed and validated for both isolates and community DNA samples of ...1. Analysis of Fusobacterium necrophorum MLVA strain type clustering using ...Single locus variants ... See full document
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Comparison of Staphylococcus aureus Isolates from Bovine and Human Skin, Milking Equipment, and Bovine Milk by Phage Typing, Pulsed Field Gel Electrophoresis, and Binary Typing
... quantitative analysis (24) may be due to epidemiological differences between the study populations and to differences in data ...the number of intramam- mary infections that was observed in their study was ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of Salmonella enterica Serovar Typhi
... the most variable VNTR loci for epidemiological typing. Forty- three potential VNTRs were identified using the web-based resource tool (6) (see Table S1 in the supplemental material). The primers were ... See full document
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